Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.32■□□□□ 0.2
USP8P40818 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
USP8P40818 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.32■□□□□ 0.2
USP8P40818 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.32■□□□□ 0.2
USP8P40818 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
USP8P40818 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.32■□□□□ 0.2
USP8P40818 AC133539.2-201ENST00000604757 467 ntBASIC16.32■□□□□ 0.2
USP8P40818 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.32■□□□□ 0.2
USP8P40818 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP8P40818 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP8P40818 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
USP8P40818 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP8P40818 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP8P40818 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
USP8P40818 AC006504.5-208ENST00000588784 2401 ntBASIC16.31■□□□□ 0.2
USP8P40818 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.31■□□□□ 0.2
USP8P40818 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.31■□□□□ 0.2
USP8P40818 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.31■□□□□ 0.2
USP8P40818 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 KRT8P22-201ENST00000562317 1415 ntBASIC16.31■□□□□ 0.2
USP8P40818 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.31■□□□□ 0.2
USP8P40818 API5-211ENST00000534695 560 ntTSL 5 BASIC16.31■□□□□ 0.2
USP8P40818 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
USP8P40818 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.31■□□□□ 0.2
USP8P40818 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.31■□□□□ 0.2
USP8P40818 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
USP8P40818 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.31■□□□□ 0.2
USP8P40818 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.31■□□□□ 0.2
USP8P40818 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
USP8P40818 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
USP8P40818 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
USP8P40818 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC16.31■□□□□ 0.2
USP8P40818 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP8P40818 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
USP8P40818 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
USP8P40818 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP8P40818 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
USP8P40818 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP8P40818 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP8P40818 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP8P40818 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
USP8P40818 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
USP8P40818 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP8P40818 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP8P40818 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.3■□□□□ 0.2
USP8P40818 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
USP8P40818 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.3■□□□□ 0.2
USP8P40818 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP8P40818 NUS1P3-201ENST00000423502 862 ntBASIC16.3■□□□□ 0.2
USP8P40818 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
USP8P40818 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.3■□□□□ 0.2
USP8P40818 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USP8P40818 AC124283.3-201ENST00000570869 594 ntBASIC16.3■□□□□ 0.2
USP8P40818 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.3■□□□□ 0.2
USP8P40818 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.3■□□□□ 0.2
USP8P40818 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.3■□□□□ 0.2
USP8P40818 TMEM261P1-201ENST00000604899 340 ntBASIC16.3■□□□□ 0.2
USP8P40818 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
USP8P40818 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
USP8P40818 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
USP8P40818 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
USP8P40818 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USP8P40818 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
USP8P40818 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP8P40818 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC16.3■□□□□ 0.2
USP8P40818 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.3■□□□□ 0.2
USP8P40818 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.3■□□□□ 0.2
USP8P40818 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
USP8P40818 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
USP8P40818 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP8P40818 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.3■□□□□ 0.2
USP8P40818 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP8P40818 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms