Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.24□□□□□ -0.29
CD40LGP29965 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.24□□□□□ -0.29
CD40LGP29965 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.24□□□□□ -0.29
CD40LGP29965 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.24□□□□□ -0.29
CD40LGP29965 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.24□□□□□ -0.29
CD40LGP29965 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.24□□□□□ -0.29
CD40LGP29965 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.24□□□□□ -0.29
CD40LGP29965 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CD40LGP29965 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.24□□□□□ -0.29
CD40LGP29965 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.24□□□□□ -0.29
CD40LGP29965 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.24□□□□□ -0.29
CD40LGP29965 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CD40LGP29965 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.24□□□□□ -0.29
CD40LGP29965 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.24□□□□□ -0.29
CD40LGP29965 AC109635.5-201ENST00000533593 962 ntBASIC13.24□□□□□ -0.29
CD40LGP29965 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.24□□□□□ -0.29
CD40LGP29965 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.24□□□□□ -0.29
CD40LGP29965 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
CD40LGP29965 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.24□□□□□ -0.29
CD40LGP29965 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CD40LGP29965 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.24□□□□□ -0.29
CD40LGP29965 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.24□□□□□ -0.29
CD40LGP29965 AL645728.2-201ENST00000641974 660 ntBASIC13.24□□□□□ -0.29
CD40LGP29965 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
CD40LGP29965 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CD40LGP29965 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.24□□□□□ -0.29
CD40LGP29965 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
CD40LGP29965 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.24□□□□□ -0.29
CD40LGP29965 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CD40LGP29965 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40LGP29965 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CD40LGP29965 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13.23□□□□□ -0.29
CD40LGP29965 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC13.23□□□□□ -0.29
CD40LGP29965 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.23□□□□□ -0.29
CD40LGP29965 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.23□□□□□ -0.29
CD40LGP29965 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CD40LGP29965 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CD40LGP29965 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.23□□□□□ -0.29
CD40LGP29965 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.23□□□□□ -0.29
CD40LGP29965 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.23□□□□□ -0.29
CD40LGP29965 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.23□□□□□ -0.29
CD40LGP29965 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.23□□□□□ -0.29
CD40LGP29965 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.23□□□□□ -0.29
CD40LGP29965 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CD40LGP29965 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
CD40LGP29965 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 AC136604.1-202ENST00000425471 771 ntBASIC13.23□□□□□ -0.29
CD40LGP29965 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 AL513480.1-201ENST00000451731 511 ntBASIC13.23□□□□□ -0.29
CD40LGP29965 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.23□□□□□ -0.29
CD40LGP29965 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.23□□□□□ -0.29
CD40LGP29965 AC135782.3-201ENST00000562782 2105 ntBASIC13.23□□□□□ -0.29
CD40LGP29965 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CD40LGP29965 AL031432.2-201ENST00000566714 459 ntBASIC13.23□□□□□ -0.29
CD40LGP29965 AL928711.1-201ENST00000570165 459 ntBASIC13.23□□□□□ -0.29
CD40LGP29965 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CD40LGP29965 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms