Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
COL8A2P25067 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.57□□□□□ -0.4
COL8A2P25067 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.57□□□□□ -0.4
COL8A2P25067 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
COL8A2P25067 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
COL8A2P25067 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
COL8A2P25067 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
COL8A2P25067 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
COL8A2P25067 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
COL8A2P25067 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
COL8A2P25067 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.56□□□□□ -0.4
COL8A2P25067 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
COL8A2P25067 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.56□□□□□ -0.4
COL8A2P25067 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.56□□□□□ -0.4
COL8A2P25067 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
COL8A2P25067 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.56□□□□□ -0.4
COL8A2P25067 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
COL8A2P25067 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.56□□□□□ -0.4
COL8A2P25067 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
COL8A2P25067 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.56□□□□□ -0.4
COL8A2P25067 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.56□□□□□ -0.4
COL8A2P25067 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
COL8A2P25067 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.56□□□□□ -0.4
COL8A2P25067 AKR7A2P1-201ENST00000460134 915 ntBASIC12.56□□□□□ -0.4
COL8A2P25067 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.56□□□□□ -0.4
COL8A2P25067 AC021723.1-201ENST00000486306 515 ntBASIC12.56□□□□□ -0.4
COL8A2P25067 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.56□□□□□ -0.4
COL8A2P25067 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.56□□□□□ -0.4
COL8A2P25067 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.56□□□□□ -0.4
COL8A2P25067 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.56□□□□□ -0.4
COL8A2P25067 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.56□□□□□ -0.4
COL8A2P25067 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
COL8A2P25067 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.56□□□□□ -0.4
COL8A2P25067 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.56□□□□□ -0.4
COL8A2P25067 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.56□□□□□ -0.4
COL8A2P25067 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.56□□□□□ -0.4
COL8A2P25067 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
COL8A2P25067 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.56□□□□□ -0.4
COL8A2P25067 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.56□□□□□ -0.4
COL8A2P25067 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
COL8A2P25067 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.56□□□□□ -0.4
COL8A2P25067 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
COL8A2P25067 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.56□□□□□ -0.4
COL8A2P25067 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
COL8A2P25067 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
COL8A2P25067 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.55□□□□□ -0.4
COL8A2P25067 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
COL8A2P25067 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
COL8A2P25067 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.55□□□□□ -0.4
COL8A2P25067 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
COL8A2P25067 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.55□□□□□ -0.4
COL8A2P25067 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
COL8A2P25067 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
COL8A2P25067 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
COL8A2P25067 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms