Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN1P18031 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.71■□□□□ 0.11
PTPN1P18031 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN1P18031 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.71■□□□□ 0.11
PTPN1P18031 AC007663.3-201ENST00000609632 465 ntBASIC15.71■□□□□ 0.11
PTPN1P18031 AL162426.1-201ENST00000624141 743 ntBASIC15.71■□□□□ 0.11
PTPN1P18031 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.71■□□□□ 0.11
PTPN1P18031 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN1P18031 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.71■□□□□ 0.11
PTPN1P18031 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN1P18031 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTPN1P18031 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTPN1P18031 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTPN1P18031 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTPN1P18031 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTPN1P18031 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.71■□□□□ 0.1
PTPN1P18031 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
PTPN1P18031 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.7■□□□□ 0.1
PTPN1P18031 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 SNX18-202ENST00000343017 3140 ntBASIC15.7■□□□□ 0.1
PTPN1P18031 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PTPN1P18031 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.7■□□□□ 0.1
PTPN1P18031 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PTPN1P18031 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PTPN1P18031 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PTPN1P18031 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PTPN1P18031 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.7■□□□□ 0.1
PTPN1P18031 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.7■□□□□ 0.1
PTPN1P18031 AC006033.1-201ENST00000440505 426 ntBASIC15.7■□□□□ 0.1
PTPN1P18031 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.7■□□□□ 0.1
PTPN1P18031 AC021723.1-201ENST00000486306 515 ntBASIC15.7■□□□□ 0.1
PTPN1P18031 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
PTPN1P18031 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
PTPN1P18031 AC243960.2-201ENST00000600996 747 ntBASIC15.7■□□□□ 0.1
PTPN1P18031 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.7■□□□□ 0.1
PTPN1P18031 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PTPN1P18031 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.7■□□□□ 0.1
PTPN1P18031 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.7■□□□□ 0.1
PTPN1P18031 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.7■□□□□ 0.1
PTPN1P18031 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PTPN1P18031 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN1P18031 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN1P18031 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.69■□□□□ 0.1
PTPN1P18031 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.69■□□□□ 0.1
PTPN1P18031 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN1P18031 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN1P18031 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN1P18031 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.69■□□□□ 0.1
PTPN1P18031 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN1P18031 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.69■□□□□ 0.1
PTPN1P18031 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN1P18031 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN1P18031 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.69■□□□□ 0.1
PTPN1P18031 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN1P18031 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.69■□□□□ 0.1
PTPN1P18031 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.69■□□□□ 0.1
PTPN1P18031 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.69■□□□□ 0.1
PTPN1P18031 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.69■□□□□ 0.1
PTPN1P18031 AL035414.1-201ENST00000451327 857 ntBASIC15.69■□□□□ 0.1
PTPN1P18031 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.69■□□□□ 0.1
PTPN1P18031 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.69■□□□□ 0.1
PTPN1P18031 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.69■□□□□ 0.1
PTPN1P18031 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN1P18031 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN1P18031 AC132192.2-201ENST00000596206 1147 ntBASIC15.69■□□□□ 0.1
PTPN1P18031 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.69■□□□□ 0.1
PTPN1P18031 GPR182-203ENST00000622922 591 ntBASIC15.69■□□□□ 0.1
PTPN1P18031 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.69■□□□□ 0.1
PTPN1P18031 KRT8P29-201ENST00000420409 1371 ntBASIC15.69■□□□□ 0.1
PTPN1P18031 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.69■□□□□ 0.1
PTPN1P18031 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PTPN1P18031 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.69■□□□□ 0.1
PTPN1P18031 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.69■□□□□ 0.1
PTPN1P18031 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN1P18031 MTHFR-210ENST00000641407 2387 ntBASIC15.69■□□□□ 0.1
PTPN1P18031 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.69■□□□□ 0.1
PTPN1P18031 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN1P18031 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms