Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYN1P17600 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 AC012508.2-201ENST00000567613 1472 ntBASIC15.91■□□□□ 0.14
SYN1P17600 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.91■□□□□ 0.14
SYN1P17600 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.91■□□□□ 0.14
SYN1P17600 AL109809.1-201ENST00000418979 1367 ntBASIC15.91■□□□□ 0.14
SYN1P17600 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.91■□□□□ 0.14
SYN1P17600 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SYN1P17600 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.91■□□□□ 0.14
SYN1P17600 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.91■□□□□ 0.14
SYN1P17600 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 AF274858.1-201ENST00000406288 372 ntBASIC15.91■□□□□ 0.14
SYN1P17600 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC15.91■□□□□ 0.14
SYN1P17600 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC15.91■□□□□ 0.14
SYN1P17600 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.91■□□□□ 0.14
SYN1P17600 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.91■□□□□ 0.14
SYN1P17600 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC15.91■□□□□ 0.14
SYN1P17600 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC15.91■□□□□ 0.14
SYN1P17600 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SYN1P17600 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC15.91■□□□□ 0.14
SYN1P17600 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.91■□□□□ 0.14
SYN1P17600 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.91■□□□□ 0.14
SYN1P17600 AL603832.2-201ENST00000566195 2125 ntBASIC15.91■□□□□ 0.14
SYN1P17600 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SYN1P17600 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SYN1P17600 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYN1P17600 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYN1P17600 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
SYN1P17600 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.9■□□□□ 0.14
SYN1P17600 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYN1P17600 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYN1P17600 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.9■□□□□ 0.14
SYN1P17600 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYN1P17600 AL136172.1-201ENST00000598590 1394 ntBASIC15.9■□□□□ 0.14
SYN1P17600 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SYN1P17600 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYN1P17600 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.9■□□□□ 0.14
SYN1P17600 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYN1P17600 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYN1P17600 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYN1P17600 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYN1P17600 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SYN1P17600 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYN1P17600 AC106827.1-201ENST00000366454 431 ntBASIC15.9■□□□□ 0.14
SYN1P17600 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SYN1P17600 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.9■□□□□ 0.14
SYN1P17600 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.9■□□□□ 0.14
SYN1P17600 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SYN1P17600 AC018638.5-201ENST00000450885 754 ntBASIC15.9■□□□□ 0.14
SYN1P17600 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC15.9■□□□□ 0.14
SYN1P17600 BCL2L12P1-201ENST00000508390 733 ntBASIC15.9■□□□□ 0.14
SYN1P17600 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC15.9■□□□□ 0.14
SYN1P17600 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC15.9■□□□□ 0.14
SYN1P17600 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.9■□□□□ 0.14
SYN1P17600 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
SYN1P17600 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC15.9■□□□□ 0.14
SYN1P17600 AC018846.1-201ENST00000568231 183 ntBASIC15.9■□□□□ 0.14
SYN1P17600 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SYN1P17600 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC15.9■□□□□ 0.14
SYN1P17600 HELLS-212ENST00000630929 400 ntTSL 5 BASIC15.9■□□□□ 0.14
SYN1P17600 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC15.9■□□□□ 0.14
SYN1P17600 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SYN1P17600 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SYN1P17600 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYN1P17600 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
SYN1P17600 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SYN1P17600 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.9■□□□□ 0.14
SYN1P17600 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.9■□□□□ 0.14
SYN1P17600 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYN1P17600 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYN1P17600 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.9■□□□□ 0.14
SYN1P17600 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SYN1P17600 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.9■□□□□ 0.14
SYN1P17600 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SYN1P17600 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SYN1P17600 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.14
SYN1P17600 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SYN1P17600 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms