Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 BTBD7P1-201ENST00000447253 1453 ntBASIC12.2□□□□□ -0.46
DEFA4P12838 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.2□□□□□ -0.46
DEFA4P12838 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.19□□□□□ -0.46
DEFA4P12838 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
DEFA4P12838 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
DEFA4P12838 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
DEFA4P12838 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.19□□□□□ -0.46
DEFA4P12838 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
DEFA4P12838 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.19□□□□□ -0.46
DEFA4P12838 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
DEFA4P12838 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
DEFA4P12838 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.19□□□□□ -0.46
DEFA4P12838 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.19□□□□□ -0.46
DEFA4P12838 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.19□□□□□ -0.46
DEFA4P12838 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.19□□□□□ -0.46
DEFA4P12838 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
DEFA4P12838 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.19□□□□□ -0.46
DEFA4P12838 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.19□□□□□ -0.46
DEFA4P12838 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.19□□□□□ -0.46
DEFA4P12838 AC092580.3-201ENST00000430932 139 ntBASIC12.19□□□□□ -0.46
DEFA4P12838 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.19□□□□□ -0.46
DEFA4P12838 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.19□□□□□ -0.46
DEFA4P12838 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.19□□□□□ -0.46
DEFA4P12838 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.19□□□□□ -0.46
DEFA4P12838 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.19□□□□□ -0.46
DEFA4P12838 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.19□□□□□ -0.46
DEFA4P12838 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.19□□□□□ -0.46
DEFA4P12838 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.19□□□□□ -0.46
DEFA4P12838 AC106028.4-201ENST00000614509 607 ntBASIC12.19□□□□□ -0.46
DEFA4P12838 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.19□□□□□ -0.46
DEFA4P12838 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.19□□□□□ -0.46
DEFA4P12838 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
DEFA4P12838 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
DEFA4P12838 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
DEFA4P12838 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.19□□□□□ -0.46
DEFA4P12838 AC012508.2-201ENST00000567613 1472 ntBASIC12.19□□□□□ -0.46
DEFA4P12838 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
DEFA4P12838 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.19□□□□□ -0.46
DEFA4P12838 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 AL731571.1-201ENST00000617058 5428 ntBASIC12.19□□□□□ -0.46
DEFA4P12838 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA4P12838 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.18□□□□□ -0.46
DEFA4P12838 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
DEFA4P12838 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
DEFA4P12838 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
DEFA4P12838 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 COL6A4P2-202ENST00000504443 2753 ntBASIC12.18□□□□□ -0.46
DEFA4P12838 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.18□□□□□ -0.46
DEFA4P12838 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.18□□□□□ -0.46
DEFA4P12838 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
DEFA4P12838 GHSR-202ENST00000427970 912 ntBASIC12.18□□□□□ -0.46
DEFA4P12838 BASP1P1-201ENST00000430708 665 ntBASIC12.18□□□□□ -0.46
DEFA4P12838 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
DEFA4P12838 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.18□□□□□ -0.46
DEFA4P12838 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 ZNF890P-202ENST00000530367 1156 ntBASIC12.18□□□□□ -0.46
DEFA4P12838 AC135586.1-201ENST00000539323 574 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms