Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 RN7SL530P-201ENST00000485097 298 ntBASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 MIR6756-201ENST00000616240 63 ntBASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 AC105137.3-201ENST00000617588 984 ntBASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 AP001184.1-201ENST00000637936 376 ntBASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 PCDHA1-201ENST00000378133 2726 ntBASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 MARK2P16-201ENST00000605714 1723 ntBASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 AL136172.1-201ENST00000598590 1394 ntBASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 API5-203ENST00000455725 2257 ntTSL 2 BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 MIR1227-201ENST00000408484 88 ntBASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 AC004837.1-201ENST00000446267 564 ntBASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 ORAOV1P1-201ENST00000503108 395 ntBASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 TMCO5B-205ENST00000530020 894 ntBASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 MT3-203ENST00000565838 421 ntTSL 3 BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 AL118508.1-201ENST00000613502 2345 ntBASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSB-PGBD3P0DP91 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 HLA-DQB1-202ENST00000399079 1501 ntBASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 AC003686.1-201ENST00000550956 1034 ntBASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms