Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RETP07949 AL158070.2-201ENST00000623713 1621 ntBASIC14.99□□□□□ -0.01
RETP07949 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RETP07949 AGAP7P-201ENST00000582299 2062 ntBASIC14.99□□□□□ -0.01
RETP07949 AGAP14-201ENST00000624701 2060 ntBASIC14.99□□□□□ -0.01
RETP07949 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
RETP07949 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RETP07949 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RETP07949 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RETP07949 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RETP07949 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RETP07949 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RETP07949 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.99□□□□□ -0.01
RETP07949 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RETP07949 AL627231.1-201ENST00000394467 1125 ntBASIC14.99□□□□□ -0.01
RETP07949 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.99□□□□□ -0.01
RETP07949 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.99□□□□□ -0.01
RETP07949 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.99□□□□□ -0.01
RETP07949 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.99□□□□□ -0.01
RETP07949 DNM1P30-201ENST00000563586 452 ntBASIC14.99□□□□□ -0.01
RETP07949 AL031713.1-201ENST00000564813 661 ntBASIC14.99□□□□□ -0.01
RETP07949 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.99□□□□□ -0.01
RETP07949 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RETP07949 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.99□□□□□ -0.01
RETP07949 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RETP07949 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
RETP07949 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.99□□□□□ -0.01
RETP07949 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RETP07949 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.99□□□□□ -0.01
RETP07949 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RETP07949 AC067930.6-201ENST00000623257 4947 ntBASIC14.99□□□□□ -0.01
RETP07949 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RETP07949 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.99□□□□□ -0.01
RETP07949 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RETP07949 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RETP07949 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RETP07949 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RETP07949 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RETP07949 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
RETP07949 AC009090.5-201ENST00000624886 2285 ntBASIC14.99□□□□□ -0.01
RETP07949 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RETP07949 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RETP07949 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
RETP07949 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RETP07949 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.98□□□□□ -0.01
RETP07949 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
RETP07949 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.98□□□□□ -0.01
RETP07949 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.98□□□□□ -0.01
RETP07949 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.98□□□□□ -0.01
RETP07949 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.98□□□□□ -0.01
RETP07949 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 AC097065.1-201ENST00000425737 517 ntBASIC14.98□□□□□ -0.01
RETP07949 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.98□□□□□ -0.01
RETP07949 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.98□□□□□ -0.01
RETP07949 POU5F1P2-201ENST00000521750 823 ntBASIC14.98□□□□□ -0.01
RETP07949 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RETP07949 GMFG-209ENST00000600322 622 ntTSL 5 BASIC14.98□□□□□ -0.01
RETP07949 AL132994.2-201ENST00000603120 687 ntBASIC14.98□□□□□ -0.01
RETP07949 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.98□□□□□ -0.01
RETP07949 AC138466.3-201ENST00000619983 221 ntBASIC14.98□□□□□ -0.01
RETP07949 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.98□□□□□ -0.01
RETP07949 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.98□□□□□ -0.01
RETP07949 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
RETP07949 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
RETP07949 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
RETP07949 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.98□□□□□ -0.01
RETP07949 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.98□□□□□ -0.01
RETP07949 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RETP07949 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RETP07949 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RETP07949 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RETP07949 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RETP07949 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.97□□□□□ -0.01
RETP07949 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms