Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.54□□□□□ -0.24
HMGN1P05114 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.54□□□□□ -0.24
HMGN1P05114 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
HMGN1P05114 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HMGN1P05114 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HMGN1P05114 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 AC092053.3-201ENST00000641308 4975 ntBASIC13.54□□□□□ -0.24
HMGN1P05114 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.54□□□□□ -0.24
HMGN1P05114 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.54□□□□□ -0.24
HMGN1P05114 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HMGN1P05114 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
HMGN1P05114 KRT8P24-201ENST00000560290 1559 ntBASIC13.54□□□□□ -0.24
HMGN1P05114 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.53□□□□□ -0.24
HMGN1P05114 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HMGN1P05114 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 AL356585.2-201ENST00000625078 2396 ntBASIC13.53□□□□□ -0.24
HMGN1P05114 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HMGN1P05114 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
HMGN1P05114 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HMGN1P05114 KRT18P13-201ENST00000400056 1290 ntBASIC13.53□□□□□ -0.24
HMGN1P05114 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.53□□□□□ -0.24
HMGN1P05114 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.53□□□□□ -0.24
HMGN1P05114 AP006288.1-201ENST00000446065 395 ntBASIC13.53□□□□□ -0.24
HMGN1P05114 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.53□□□□□ -0.24
HMGN1P05114 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
HMGN1P05114 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.53□□□□□ -0.24
HMGN1P05114 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.53□□□□□ -0.24
HMGN1P05114 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.53□□□□□ -0.24
HMGN1P05114 AC092865.5-201ENST00000545435 363 ntBASIC13.53□□□□□ -0.24
HMGN1P05114 AC036164.1-201ENST00000570544 333 ntBASIC13.53□□□□□ -0.24
HMGN1P05114 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HMGN1P05114 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.53□□□□□ -0.24
HMGN1P05114 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HMGN1P05114 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HMGN1P05114 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.53□□□□□ -0.24
HMGN1P05114 PRSS30P-206ENST00000641773 873 ntBASIC13.53□□□□□ -0.24
HMGN1P05114 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
HMGN1P05114 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HMGN1P05114 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HMGN1P05114 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HMGN1P05114 CLK3P2-201ENST00000427566 1453 ntBASIC13.53□□□□□ -0.24
HMGN1P05114 AC020910.6-201ENST00000623084 1459 ntBASIC13.53□□□□□ -0.24
HMGN1P05114 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HMGN1P05114 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGN1P05114 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
HMGN1P05114 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
HMGN1P05114 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HMGN1P05114 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HMGN1P05114 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.52□□□□□ -0.24
HMGN1P05114 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HMGN1P05114 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
HMGN1P05114 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.52□□□□□ -0.24
HMGN1P05114 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HMGN1P05114 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.52□□□□□ -0.24
HMGN1P05114 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HMGN1P05114 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.52□□□□□ -0.24
HMGN1P05114 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
HMGN1P05114 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.52□□□□□ -0.24
HMGN1P05114 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMGN1P05114 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMGN1P05114 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HMGN1P05114 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
HMGN1P05114 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.52□□□□□ -0.25
HMGN1P05114 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.52□□□□□ -0.25
HMGN1P05114 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HMGN1P05114 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.52□□□□□ -0.25
HMGN1P05114 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.52□□□□□ -0.25
HMGN1P05114 AC107890.1-201ENST00000422478 521 ntBASIC13.52□□□□□ -0.25
HMGN1P05114 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms