Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
MT-CO1P00395 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-CO1P00395 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-CO1P00395 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-CO1P00395 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MT-CO1P00395 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-CO1P00395 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MT-CO1P00395 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
MT-CO1P00395 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-CO1P00395 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
MT-CO1P00395 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MT-CO1P00395 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MT-CO1P00395 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MT-CO1P00395 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.29■□□□□ 0.04
MT-CO1P00395 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
MT-CO1P00395 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.28■□□□□ 0.04
MT-CO1P00395 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
MT-CO1P00395 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MT-CO1P00395 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.28■□□□□ 0.04
MT-CO1P00395 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.28■□□□□ 0.04
MT-CO1P00395 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MT-CO1P00395 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.28■□□□□ 0.04
MT-CO1P00395 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MT-CO1P00395 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
MT-CO1P00395 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 AC009093.2-202ENST00000620513 2079 ntBASIC15.28■□□□□ 0.04
MT-CO1P00395 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
MT-CO1P00395 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
MT-CO1P00395 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.28■□□□□ 0.04
MT-CO1P00395 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.28■□□□□ 0.04
MT-CO1P00395 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.28■□□□□ 0.04
MT-CO1P00395 HOMER2P2-201ENST00000451621 847 ntBASIC15.28■□□□□ 0.04
MT-CO1P00395 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.28■□□□□ 0.04
MT-CO1P00395 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.28■□□□□ 0.04
MT-CO1P00395 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.28■□□□□ 0.04
MT-CO1P00395 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.28■□□□□ 0.04
MT-CO1P00395 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.28■□□□□ 0.04
MT-CO1P00395 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
MT-CO1P00395 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
MT-CO1P00395 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.28■□□□□ 0.04
MT-CO1P00395 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.28■□□□□ 0.04
MT-CO1P00395 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
MT-CO1P00395 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
MT-CO1P00395 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.28■□□□□ 0.04
MT-CO1P00395 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-CO1P00395 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MT-CO1P00395 AC011840.2-201ENST00000563063 1520 ntBASIC15.27■□□□□ 0.04
MT-CO1P00395 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.27■□□□□ 0.04
MT-CO1P00395 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MT-CO1P00395 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
MT-CO1P00395 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MT-CO1P00395 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.27■□□□□ 0.04
MT-CO1P00395 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MT-CO1P00395 SBF1P1-201ENST00000444527 5631 ntBASIC15.27■□□□□ 0.04
MT-CO1P00395 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MT-CO1P00395 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MT-CO1P00395 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MT-CO1P00395 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MT-CO1P00395 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MT-CO1P00395 MIR326-201ENST00000362220 95 ntBASIC15.27■□□□□ 0.04
MT-CO1P00395 BRWD1P1-201ENST00000401091 371 ntBASIC15.27■□□□□ 0.04
MT-CO1P00395 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.27■□□□□ 0.04
MT-CO1P00395 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MT-CO1P00395 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.27■□□□□ 0.04
MT-CO1P00395 GOLGA2P4-201ENST00000441462 777 ntBASIC15.27■□□□□ 0.04
MT-CO1P00395 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.27■□□□□ 0.04
MT-CO1P00395 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.27■□□□□ 0.04
MT-CO1P00395 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.27■□□□□ 0.04
MT-CO1P00395 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
MT-CO1P00395 FAM86HP-204ENST00000513466 959 ntBASIC15.27■□□□□ 0.04
MT-CO1P00395 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MT-CO1P00395 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.27■□□□□ 0.04
MT-CO1P00395 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.27■□□□□ 0.04
MT-CO1P00395 PPY2P-201ENST00000582808 702 ntBASIC15.27■□□□□ 0.04
MT-CO1P00395 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MT-CO1P00395 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.27■□□□□ 0.04
MT-CO1P00395 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms