Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
ALDH1A1P00352 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALDH1A1P00352 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.64■□□□□ 0.25
ALDH1A1P00352 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ALDH1A1P00352 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALDH1A1P00352 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC16.64■□□□□ 0.25
ALDH1A1P00352 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
ALDH1A1P00352 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALDH1A1P00352 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.64■□□□□ 0.25
ALDH1A1P00352 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALDH1A1P00352 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.64■□□□□ 0.25
ALDH1A1P00352 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALDH1A1P00352 RNVU1-8-201ENST00000364272 125 ntBASIC16.64■□□□□ 0.25
ALDH1A1P00352 AP000354.1-201ENST00000396982 456 ntBASIC16.64■□□□□ 0.25
ALDH1A1P00352 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC16.64■□□□□ 0.25
ALDH1A1P00352 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC16.64■□□□□ 0.25
ALDH1A1P00352 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.64■□□□□ 0.25
ALDH1A1P00352 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ALDH1A1P00352 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ALDH1A1P00352 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC16.64■□□□□ 0.25
ALDH1A1P00352 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.64■□□□□ 0.25
ALDH1A1P00352 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALDH1A1P00352 AL133467.4-201ENST00000602953 725 ntBASIC16.64■□□□□ 0.25
ALDH1A1P00352 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.64■□□□□ 0.25
ALDH1A1P00352 HELLS-212ENST00000630929 400 ntTSL 5 BASIC16.64■□□□□ 0.25
ALDH1A1P00352 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALDH1A1P00352 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ALDH1A1P00352 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALDH1A1P00352 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.64■□□□□ 0.25
ALDH1A1P00352 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.64■□□□□ 0.25
ALDH1A1P00352 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALDH1A1P00352 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALDH1A1P00352 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALDH1A1P00352 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.63■□□□□ 0.25
ALDH1A1P00352 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ALDH1A1P00352 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ALDH1A1P00352 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ALDH1A1P00352 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.63■□□□□ 0.25
ALDH1A1P00352 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ALDH1A1P00352 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ALDH1A1P00352 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC16.63■□□□□ 0.25
ALDH1A1P00352 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
ALDH1A1P00352 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ALDH1A1P00352 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ALDH1A1P00352 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ALDH1A1P00352 OR8T1P-201ENST00000421347 918 ntBASIC16.63■□□□□ 0.25
ALDH1A1P00352 NME6-208ENST00000435684 599 ntTSL 2 BASIC16.63■□□□□ 0.25
ALDH1A1P00352 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC16.63■□□□□ 0.25
ALDH1A1P00352 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC16.63■□□□□ 0.25
ALDH1A1P00352 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC16.63■□□□□ 0.25
ALDH1A1P00352 AC018846.1-201ENST00000568231 183 ntBASIC16.63■□□□□ 0.25
ALDH1A1P00352 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ALDH1A1P00352 MBP-238ENST00000580402 915 ntTSL 5 BASIC16.63■□□□□ 0.25
ALDH1A1P00352 GAS7-216ENST00000583882 553 ntTSL 5 BASIC16.63■□□□□ 0.25
ALDH1A1P00352 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC16.63■□□□□ 0.25
ALDH1A1P00352 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC16.63■□□□□ 0.25
ALDH1A1P00352 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ALDH1A1P00352 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ALDH1A1P00352 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ALDH1A1P00352 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ALDH1A1P00352 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ALDH1A1P00352 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ALDH1A1P00352 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ALDH1A1P00352 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ALDH1A1P00352 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.63■□□□□ 0.25
ALDH1A1P00352 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ALDH1A1P00352 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.63■□□□□ 0.25
ALDH1A1P00352 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ALDH1A1P00352 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ALDH1A1P00352 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ALDH1A1P00352 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALDH1A1P00352 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALDH1A1P00352 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.62■□□□□ 0.25
ALDH1A1P00352 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
ALDH1A1P00352 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALDH1A1P00352 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ALDH1A1P00352 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.62■□□□□ 0.25
ALDH1A1P00352 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALDH1A1P00352 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
ALDH1A1P00352 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.62■□□□□ 0.25
ALDH1A1P00352 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ALDH1A1P00352 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ALDH1A1P00352 PTGER4P2-201ENST00000328411 252 ntBASIC16.62■□□□□ 0.25
ALDH1A1P00352 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC16.62■□□□□ 0.25
ALDH1A1P00352 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC16.62■□□□□ 0.25
ALDH1A1P00352 AL929302.1-201ENST00000426556 871 ntBASIC16.62■□□□□ 0.25
ALDH1A1P00352 AC092580.1-201ENST00000433998 658 ntBASIC16.62■□□□□ 0.25
ALDH1A1P00352 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC16.62■□□□□ 0.25
ALDH1A1P00352 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC16.62■□□□□ 0.25
ALDH1A1P00352 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.62■□□□□ 0.25
ALDH1A1P00352 PTGER4P3-201ENST00000458150 252 ntBASIC16.62■□□□□ 0.25
ALDH1A1P00352 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.62■□□□□ 0.25
ALDH1A1P00352 CASP3-205ENST00000517513 964 ntTSL 5 BASIC16.62■□□□□ 0.25
ALDH1A1P00352 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ALDH1A1P00352 FOXN3-AS2-201ENST00000554071 1262 ntBASIC16.62■□□□□ 0.25
ALDH1A1P00352 AC013553.1-201ENST00000560906 267 ntBASIC16.62■□□□□ 0.25
ALDH1A1P00352 SNORD3B-1-201ENST00000577988 758 ntBASIC16.62■□□□□ 0.25
ALDH1A1P00352 TRMT112P3-201ENST00000580149 358 ntBASIC16.62■□□□□ 0.25
ALDH1A1P00352 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ALDH1A1P00352 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms