Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNOT4O95628 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNOT4O95628 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.3□□□□□ -0.28
CNOT4O95628 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNOT4O95628 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNOT4O95628 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CNOT4O95628 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNOT4O95628 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNOT4O95628 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.3□□□□□ -0.28
CNOT4O95628 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CNOT4O95628 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNOT4O95628 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNOT4O95628 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNOT4O95628 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNOT4O95628 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.3□□□□□ -0.28
CNOT4O95628 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNOT4O95628 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNOT4O95628 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNOT4O95628 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.29□□□□□ -0.28
CNOT4O95628 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.29□□□□□ -0.28
CNOT4O95628 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CNOT4O95628 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.29□□□□□ -0.28
CNOT4O95628 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.29□□□□□ -0.28
CNOT4O95628 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.29□□□□□ -0.28
CNOT4O95628 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.29□□□□□ -0.28
CNOT4O95628 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.29□□□□□ -0.28
CNOT4O95628 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 AC026954.1-201ENST00000429771 1293 ntBASIC13.29□□□□□ -0.28
CNOT4O95628 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.29□□□□□ -0.28
CNOT4O95628 FAM8A4P-201ENST00000435433 1213 ntBASIC13.29□□□□□ -0.28
CNOT4O95628 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CNOT4O95628 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.29□□□□□ -0.28
CNOT4O95628 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.29□□□□□ -0.28
CNOT4O95628 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.29□□□□□ -0.28
CNOT4O95628 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
CNOT4O95628 AL109954.1-202ENST00000564051 2148 ntBASIC13.29□□□□□ -0.28
CNOT4O95628 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.29□□□□□ -0.28
CNOT4O95628 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.29□□□□□ -0.28
CNOT4O95628 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.29□□□□□ -0.28
CNOT4O95628 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.29□□□□□ -0.28
CNOT4O95628 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.29□□□□□ -0.28
CNOT4O95628 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.29□□□□□ -0.28
CNOT4O95628 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.29□□□□□ -0.28
CNOT4O95628 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
CNOT4O95628 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 CICP4-201ENST00000447359 2812 ntBASIC13.29□□□□□ -0.28
CNOT4O95628 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
CNOT4O95628 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.29□□□□□ -0.28
CNOT4O95628 AL157414.3-201ENST00000624276 1954 ntBASIC13.29□□□□□ -0.28
CNOT4O95628 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 AL354989.2-201ENST00000435838 1540 ntBASIC13.29□□□□□ -0.28
CNOT4O95628 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNOT4O95628 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CNOT4O95628 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.28□□□□□ -0.28
CNOT4O95628 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CNOT4O95628 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.28□□□□□ -0.28
CNOT4O95628 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CNOT4O95628 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.28□□□□□ -0.28
CNOT4O95628 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CNOT4O95628 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.28□□□□□ -0.28
CNOT4O95628 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CNOT4O95628 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.28□□□□□ -0.28
CNOT4O95628 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms