Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CLDN11O75508 AC018735.1-201ENST00000437208 1502 ntBASIC15.12■□□□□ 0.01
CLDN11O75508 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
CLDN11O75508 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN11O75508 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CLDN11O75508 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN11O75508 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN11O75508 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN11O75508 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN11O75508 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN11O75508 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN11O75508 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN11O75508 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CLDN11O75508 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN11O75508 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN11O75508 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN11O75508 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CLDN11O75508 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CLDN11O75508 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN11O75508 AC009093.10-201ENST00000641956 1442 ntBASIC15.12■□□□□ 0.01
CLDN11O75508 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CLDN11O75508 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN11O75508 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
CLDN11O75508 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN11O75508 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN11O75508 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN11O75508 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN11O75508 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN11O75508 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN11O75508 AP001258.2-201ENST00000529891 490 ntBASIC15.12■□□□□ 0.01
CLDN11O75508 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.12■□□□□ 0.01
CLDN11O75508 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN11O75508 AC015688.4-201ENST00000580780 1647 ntBASIC15.12■□□□□ 0.01
CLDN11O75508 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
CLDN11O75508 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN11O75508 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN11O75508 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN11O75508 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN11O75508 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN11O75508 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN11O75508 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN11O75508 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN11O75508 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN11O75508 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CLDN11O75508 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN11O75508 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.11■□□□□ 0.01
CLDN11O75508 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN11O75508 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN11O75508 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
CLDN11O75508 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN11O75508 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN11O75508 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN11O75508 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN11O75508 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN11O75508 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN11O75508 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CLDN11O75508 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CLDN11O75508 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN11O75508 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN11O75508 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN11O75508 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN11O75508 SERPINA13P-202ENST00000478994 924 ntBASIC15.11■□□□□ 0.01
CLDN11O75508 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN11O75508 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.11■□□□□ 0.01
CLDN11O75508 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.11■□□□□ 0.01
CLDN11O75508 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
CLDN11O75508 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN11O75508 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN11O75508 AC005324.6-201ENST00000587972 613 ntBASIC15.11■□□□□ 0.01
CLDN11O75508 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
CLDN11O75508 BNIP3P13-201ENST00000599968 566 ntBASIC15.11■□□□□ 0.01
CLDN11O75508 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN11O75508 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN11O75508 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN11O75508 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN11O75508 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN11O75508 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN11O75508 AL008718.2-201ENST00000609206 1313 ntBASIC15.11■□□□□ 0.01
CLDN11O75508 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN11O75508 KHSRPP1-201ENST00000427983 1768 ntBASIC15.11■□□□□ 0.01
CLDN11O75508 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN11O75508 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN11O75508 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN11O75508 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN11O75508 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
CLDN11O75508 KRT8P28-201ENST00000433288 1390 ntBASIC15.11■□□□□ 0.01
CLDN11O75508 AC020907.1-201ENST00000616460 1350 ntBASIC15.11■□□□□ 0.01
CLDN11O75508 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN11O75508 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN11O75508 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CLDN11O75508 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CLDN11O75508 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN11O75508 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CLDN11O75508 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN11O75508 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms