Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SCN2BO60939 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SCN2BO60939 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCN2BO60939 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SCN2BO60939 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SCN2BO60939 ACTBP8-201ENST00000403258 1108 ntBASIC14.13□□□□□ -0.15
SCN2BO60939 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SCN2BO60939 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.13□□□□□ -0.15
SCN2BO60939 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.13□□□□□ -0.15
SCN2BO60939 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.13□□□□□ -0.15
SCN2BO60939 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCN2BO60939 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.13□□□□□ -0.15
SCN2BO60939 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.13□□□□□ -0.15
SCN2BO60939 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.13□□□□□ -0.15
SCN2BO60939 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
SCN2BO60939 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCN2BO60939 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SCN2BO60939 AP005019.2-201ENST00000615104 511 ntBASIC14.13□□□□□ -0.15
SCN2BO60939 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SCN2BO60939 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCN2BO60939 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SCN2BO60939 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCN2BO60939 SALL4P5-201ENST00000419001 1760 ntBASIC14.13□□□□□ -0.15
SCN2BO60939 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SCN2BO60939 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.13□□□□□ -0.15
SCN2BO60939 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCN2BO60939 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCN2BO60939 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SCN2BO60939 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.13□□□□□ -0.15
SCN2BO60939 AC012617.1-204ENST00000586340 2305 ntBASIC14.13□□□□□ -0.15
SCN2BO60939 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.13□□□□□ -0.15
SCN2BO60939 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SCN2BO60939 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SCN2BO60939 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SCN2BO60939 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 MYADML-201ENST00000474610 2147 ntBASIC14.12□□□□□ -0.15
SCN2BO60939 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.12□□□□□ -0.15
SCN2BO60939 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SCN2BO60939 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.12□□□□□ -0.15
SCN2BO60939 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SCN2BO60939 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SCN2BO60939 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SCN2BO60939 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.12□□□□□ -0.15
SCN2BO60939 DFFBP1-201ENST00000433250 979 ntBASIC14.12□□□□□ -0.15
SCN2BO60939 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.12□□□□□ -0.15
SCN2BO60939 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SCN2BO60939 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.12□□□□□ -0.15
SCN2BO60939 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
SCN2BO60939 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.12□□□□□ -0.15
SCN2BO60939 AC131206.1-201ENST00000538078 1211 ntBASIC14.12□□□□□ -0.15
SCN2BO60939 AC123567.1-201ENST00000548294 1261 ntBASIC14.12□□□□□ -0.15
SCN2BO60939 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 CHCHD2P3-201ENST00000603038 451 ntBASIC14.12□□□□□ -0.15
SCN2BO60939 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.12□□□□□ -0.15
SCN2BO60939 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.12□□□□□ -0.15
SCN2BO60939 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.12□□□□□ -0.15
SCN2BO60939 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 AL138725.1-201ENST00000407347 1314 ntBASIC14.12□□□□□ -0.15
SCN2BO60939 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.12□□□□□ -0.15
SCN2BO60939 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
SCN2BO60939 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SCN2BO60939 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
SCN2BO60939 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.11□□□□□ -0.15
SCN2BO60939 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SCN2BO60939 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SCN2BO60939 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SCN2BO60939 AC011474.4-201ENST00000623523 2076 ntBASIC14.11□□□□□ -0.15
SCN2BO60939 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.11□□□□□ -0.15
SCN2BO60939 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SCN2BO60939 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.11□□□□□ -0.15
SCN2BO60939 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SCN2BO60939 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.11□□□□□ -0.15
SCN2BO60939 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.11□□□□□ -0.15
SCN2BO60939 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SCN2BO60939 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms