Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IDH3BO43837 TUBB3P1-201ENST00000405796 1332 ntBASIC13.78□□□□□ -0.2
IDH3BO43837 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IDH3BO43837 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IDH3BO43837 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
IDH3BO43837 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IDH3BO43837 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IDH3BO43837 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IDH3BO43837 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.78□□□□□ -0.2
IDH3BO43837 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.78□□□□□ -0.2
IDH3BO43837 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
IDH3BO43837 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
IDH3BO43837 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
IDH3BO43837 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IDH3BO43837 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
IDH3BO43837 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.78□□□□□ -0.2
IDH3BO43837 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IDH3BO43837 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
IDH3BO43837 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IDH3BO43837 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IDH3BO43837 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.78□□□□□ -0.2
IDH3BO43837 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
IDH3BO43837 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
IDH3BO43837 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
IDH3BO43837 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.2
IDH3BO43837 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
IDH3BO43837 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
IDH3BO43837 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
IDH3BO43837 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
IDH3BO43837 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IDH3BO43837 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
IDH3BO43837 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IDH3BO43837 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
IDH3BO43837 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IDH3BO43837 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
IDH3BO43837 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IDH3BO43837 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IDH3BO43837 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.77□□□□□ -0.21
IDH3BO43837 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IDH3BO43837 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
IDH3BO43837 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IDH3BO43837 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.77□□□□□ -0.21
IDH3BO43837 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.77□□□□□ -0.21
IDH3BO43837 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IDH3BO43837 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
IDH3BO43837 AC018442.1-201ENST00000421439 2061 ntBASIC13.77□□□□□ -0.21
IDH3BO43837 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.77□□□□□ -0.21
IDH3BO43837 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IDH3BO43837 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
IDH3BO43837 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.77□□□□□ -0.21
IDH3BO43837 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IDH3BO43837 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.77□□□□□ -0.21
IDH3BO43837 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.77□□□□□ -0.21
IDH3BO43837 AC069120.2-201ENST00000524091 540 ntBASIC13.77□□□□□ -0.21
IDH3BO43837 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.77□□□□□ -0.21
IDH3BO43837 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IDH3BO43837 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
IDH3BO43837 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
IDH3BO43837 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
IDH3BO43837 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.77□□□□□ -0.21
IDH3BO43837 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
IDH3BO43837 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
IDH3BO43837 AC025678.2-201ENST00000562061 970 ntBASIC13.77□□□□□ -0.21
IDH3BO43837 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
IDH3BO43837 AC015911.4-201ENST00000588022 1070 ntBASIC13.77□□□□□ -0.21
IDH3BO43837 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.77□□□□□ -0.21
IDH3BO43837 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
IDH3BO43837 AC027612.4-201ENST00000605371 583 ntBASIC13.77□□□□□ -0.21
IDH3BO43837 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
IDH3BO43837 AC004461.2-201ENST00000629517 803 ntBASIC13.77□□□□□ -0.21
IDH3BO43837 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.77□□□□□ -0.21
IDH3BO43837 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.77□□□□□ -0.21
IDH3BO43837 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
IDH3BO43837 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IDH3BO43837 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IDH3BO43837 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IDH3BO43837 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IDH3BO43837 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
IDH3BO43837 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IDH3BO43837 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IDH3BO43837 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IDH3BO43837 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
IDH3BO43837 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IDH3BO43837 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.76□□□□□ -0.21
IDH3BO43837 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.76□□□□□ -0.21
IDH3BO43837 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
IDH3BO43837 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IDH3BO43837 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
IDH3BO43837 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
IDH3BO43837 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.76□□□□□ -0.21
IDH3BO43837 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
IDH3BO43837 LILRP1-201ENST00000444199 1370 ntBASIC13.76□□□□□ -0.21
IDH3BO43837 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IDH3BO43837 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IDH3BO43837 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.76□□□□□ -0.21
IDH3BO43837 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IDH3BO43837 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IDH3BO43837 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
IDH3BO43837 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
IDH3BO43837 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms