Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CHMP2AO43633 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CHMP2AO43633 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CHMP2AO43633 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CHMP2AO43633 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.73■□□□□ 0.27
CHMP2AO43633 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CHMP2AO43633 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.73■□□□□ 0.27
CHMP2AO43633 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.73■□□□□ 0.27
CHMP2AO43633 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP2AO43633 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP2AO43633 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP2AO43633 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.72■□□□□ 0.27
CHMP2AO43633 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP2AO43633 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP2AO43633 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CHMP2AO43633 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CHMP2AO43633 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.72■□□□□ 0.27
CHMP2AO43633 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.72■□□□□ 0.27
CHMP2AO43633 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP2AO43633 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CHMP2AO43633 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CHMP2AO43633 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.72■□□□□ 0.27
CHMP2AO43633 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP2AO43633 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
CHMP2AO43633 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.72■□□□□ 0.27
CHMP2AO43633 HSPB1P2-201ENST00000448722 546 ntBASIC16.72■□□□□ 0.27
CHMP2AO43633 PFN1P12-201ENST00000455938 534 ntBASIC16.72■□□□□ 0.27
CHMP2AO43633 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.72■□□□□ 0.27
CHMP2AO43633 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.72■□□□□ 0.27
CHMP2AO43633 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.72■□□□□ 0.27
CHMP2AO43633 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.72■□□□□ 0.27
CHMP2AO43633 AC131206.1-201ENST00000538078 1211 ntBASIC16.72■□□□□ 0.27
CHMP2AO43633 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CHMP2AO43633 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.72■□□□□ 0.27
CHMP2AO43633 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.72■□□□□ 0.27
CHMP2AO43633 AC104982.3-201ENST00000581995 514 ntBASIC16.72■□□□□ 0.27
CHMP2AO43633 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.72■□□□□ 0.27
CHMP2AO43633 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP2AO43633 AC097376.2-205ENST00000610159 5334 ntBASIC16.72■□□□□ 0.27
CHMP2AO43633 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.72■□□□□ 0.27
CHMP2AO43633 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP2AO43633 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP2AO43633 AL136172.1-201ENST00000598590 1394 ntBASIC16.72■□□□□ 0.27
CHMP2AO43633 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.72■□□□□ 0.27
CHMP2AO43633 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP2AO43633 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP2AO43633 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.72■□□□□ 0.27
CHMP2AO43633 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.72■□□□□ 0.27
CHMP2AO43633 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP2AO43633 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP2AO43633 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP2AO43633 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP2AO43633 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CHMP2AO43633 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CHMP2AO43633 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP2AO43633 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP2AO43633 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CHMP2AO43633 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP2AO43633 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.71■□□□□ 0.27
CHMP2AO43633 OR2I1P-209ENST00000641730 5365 ntBASIC16.71■□□□□ 0.27
CHMP2AO43633 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP2AO43633 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP2AO43633 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP2AO43633 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP2AO43633 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP2AO43633 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP2AO43633 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.71■□□□□ 0.27
CHMP2AO43633 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP2AO43633 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.71■□□□□ 0.27
CHMP2AO43633 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP2AO43633 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.71■□□□□ 0.27
CHMP2AO43633 AL591846.1-201ENST00000451736 433 ntBASIC16.71■□□□□ 0.27
CHMP2AO43633 AC104306.2-201ENST00000451877 341 ntBASIC16.71■□□□□ 0.27
CHMP2AO43633 GCOM2-201ENST00000509133 1104 ntBASIC16.71■□□□□ 0.27
CHMP2AO43633 AC243960.2-201ENST00000600996 747 ntBASIC16.71■□□□□ 0.27
CHMP2AO43633 AL118558.3-201ENST00000607414 1079 ntBASIC16.71■□□□□ 0.27
CHMP2AO43633 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP2AO43633 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.71■□□□□ 0.27
CHMP2AO43633 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CHMP2AO43633 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP2AO43633 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP2AO43633 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP2AO43633 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP2AO43633 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.71■□□□□ 0.27
CHMP2AO43633 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP2AO43633 CICP24-201ENST00000605464 2705 ntBASIC16.71■□□□□ 0.27
CHMP2AO43633 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP2AO43633 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP2AO43633 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CHMP2AO43633 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP2AO43633 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP2AO43633 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
CHMP2AO43633 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
CHMP2AO43633 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
CHMP2AO43633 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms