Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.12■□□□□ 0.01
RIPK2O43353 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.12■□□□□ 0.01
RIPK2O43353 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.12■□□□□ 0.01
RIPK2O43353 AC026434.2-201ENST00000506094 1078 ntBASIC15.12■□□□□ 0.01
RIPK2O43353 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RIPK2O43353 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RIPK2O43353 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.12■□□□□ 0.01
RIPK2O43353 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 AL844908.2-201ENST00000609461 460 ntBASIC15.12■□□□□ 0.01
RIPK2O43353 AL596442.2-201ENST00000610240 980 ntBASIC15.12■□□□□ 0.01
RIPK2O43353 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.12■□□□□ 0.01
RIPK2O43353 AC073592.8-201ENST00000624126 511 ntBASIC15.12■□□□□ 0.01
RIPK2O43353 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RIPK2O43353 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.12■□□□□ 0.01
RIPK2O43353 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.12■□□□□ 0.01
RIPK2O43353 AC068760.1-201ENST00000493579 1953 ntBASIC15.12■□□□□ 0.01
RIPK2O43353 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
RIPK2O43353 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 AC087499.5-201ENST00000452760 1342 ntBASIC15.12■□□□□ 0.01
RIPK2O43353 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC15.12■□□□□ 0.01
RIPK2O43353 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.12■□□□□ 0.01
RIPK2O43353 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC15.11■□□□□ 0.01
RIPK2O43353 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RIPK2O43353 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
RIPK2O43353 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RIPK2O43353 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.11■□□□□ 0.01
RIPK2O43353 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RIPK2O43353 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.11■□□□□ 0.01
RIPK2O43353 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RIPK2O43353 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.11■□□□□ 0.01
RIPK2O43353 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.11■□□□□ 0.01
RIPK2O43353 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.11■□□□□ 0.01
RIPK2O43353 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.11■□□□□ 0.01
RIPK2O43353 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.11■□□□□ 0.01
RIPK2O43353 NUS1P3-201ENST00000423502 862 ntBASIC15.11■□□□□ 0.01
RIPK2O43353 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.11■□□□□ 0.01
RIPK2O43353 MEIS3P1-201ENST00000495167 958 ntBASIC15.11■□□□□ 0.01
RIPK2O43353 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.11■□□□□ 0.01
RIPK2O43353 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.11■□□□□ 0.01
RIPK2O43353 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
RIPK2O43353 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.11■□□□□ 0.01
RIPK2O43353 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
RIPK2O43353 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.11■□□□□ 0.01
RIPK2O43353 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.11■□□□□ 0.01
RIPK2O43353 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.11■□□□□ 0.01
RIPK2O43353 AC126335.2-201ENST00000623362 4637 ntBASIC15.11■□□□□ 0.01
RIPK2O43353 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
RIPK2O43353 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
RIPK2O43353 AL157996.1-201ENST00000624684 2299 ntBASIC15.11■□□□□ 0.01
RIPK2O43353 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC15.11■□□□□ 0.01
RIPK2O43353 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
RIPK2O43353 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.11■□□□□ 0.01
RIPK2O43353 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
RIPK2O43353 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.11■□□□□ 0.01
RIPK2O43353 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RIPK2O43353 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RIPK2O43353 AC072061.1-201ENST00000569710 2234 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms