Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
E2F3O00716 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
E2F3O00716 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
E2F3O00716 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
E2F3O00716 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
E2F3O00716 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
E2F3O00716 AC092135.3-201ENST00000624151 1846 ntBASIC14.53□□□□□ -0.08
E2F3O00716 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
E2F3O00716 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
E2F3O00716 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
E2F3O00716 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
E2F3O00716 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
E2F3O00716 KRT8P35-201ENST00000483942 1338 ntBASIC14.53□□□□□ -0.08
E2F3O00716 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
E2F3O00716 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.53□□□□□ -0.08
E2F3O00716 AL162726.2-201ENST00000438986 1017 ntBASIC14.53□□□□□ -0.08
E2F3O00716 KRT223P-202ENST00000449164 1292 ntBASIC14.53□□□□□ -0.08
E2F3O00716 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.53□□□□□ -0.08
E2F3O00716 AC022137.2-201ENST00000503482 481 ntBASIC14.53□□□□□ -0.08
E2F3O00716 KRT18P25-201ENST00000508931 1278 ntBASIC14.53□□□□□ -0.08
E2F3O00716 AP005482.1-201ENST00000563722 1273 ntBASIC14.53□□□□□ -0.08
E2F3O00716 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.53□□□□□ -0.08
E2F3O00716 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.53□□□□□ -0.08
E2F3O00716 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.53□□□□□ -0.08
E2F3O00716 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.53□□□□□ -0.08
E2F3O00716 CU634019.7-201ENST00000624153 1185 ntBASIC14.53□□□□□ -0.08
E2F3O00716 FP236241.2-201ENST00000624906 1185 ntBASIC14.53□□□□□ -0.08
E2F3O00716 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
E2F3O00716 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.53□□□□□ -0.08
E2F3O00716 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
E2F3O00716 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
E2F3O00716 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
E2F3O00716 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.53□□□□□ -0.08
E2F3O00716 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
E2F3O00716 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
E2F3O00716 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
E2F3O00716 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
E2F3O00716 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
E2F3O00716 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.52□□□□□ -0.08
E2F3O00716 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
E2F3O00716 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
E2F3O00716 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
E2F3O00716 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.52□□□□□ -0.08
E2F3O00716 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
E2F3O00716 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.52□□□□□ -0.08
E2F3O00716 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
E2F3O00716 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
E2F3O00716 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
E2F3O00716 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
E2F3O00716 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
E2F3O00716 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
E2F3O00716 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.52□□□□□ -0.08
E2F3O00716 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
E2F3O00716 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.52□□□□□ -0.08
E2F3O00716 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
E2F3O00716 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
E2F3O00716 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
E2F3O00716 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
E2F3O00716 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.52□□□□□ -0.08
E2F3O00716 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.52□□□□□ -0.08
E2F3O00716 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
E2F3O00716 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
E2F3O00716 ANKRD19P-201ENST00000338192 862 ntBASIC14.52□□□□□ -0.09
E2F3O00716 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.52□□□□□ -0.09
E2F3O00716 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.52□□□□□ -0.09
E2F3O00716 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
E2F3O00716 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.52□□□□□ -0.09
E2F3O00716 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
E2F3O00716 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
E2F3O00716 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.52□□□□□ -0.09
E2F3O00716 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
E2F3O00716 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.52□□□□□ -0.09
E2F3O00716 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.52□□□□□ -0.09
E2F3O00716 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.52□□□□□ -0.09
E2F3O00716 AC131206.1-201ENST00000538078 1211 ntBASIC14.52□□□□□ -0.09
E2F3O00716 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.52□□□□□ -0.09
E2F3O00716 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
E2F3O00716 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.52□□□□□ -0.09
E2F3O00716 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.52□□□□□ -0.09
E2F3O00716 MIR6775-201ENST00000617557 69 ntBASIC14.52□□□□□ -0.09
E2F3O00716 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.52□□□□□ -0.09
E2F3O00716 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.52□□□□□ -0.09
E2F3O00716 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
E2F3O00716 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
E2F3O00716 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.52□□□□□ -0.09
E2F3O00716 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
E2F3O00716 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
E2F3O00716 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.52□□□□□ -0.09
E2F3O00716 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
E2F3O00716 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
E2F3O00716 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
E2F3O00716 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.52□□□□□ -0.09
E2F3O00716 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
E2F3O00716 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
E2F3O00716 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
E2F3O00716 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
E2F3O00716 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
E2F3O00716 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
E2F3O00716 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
E2F3O00716 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms