Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 AC092384.3-202ENST00000564646 2873 ntBASIC12.93□□□□□ -0.34
MBD3L3A6NE82 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 LINC01165-201ENST00000445190 1623 ntBASIC12.93□□□□□ -0.34
MBD3L3A6NE82 AC015688.4-201ENST00000580780 1647 ntBASIC12.93□□□□□ -0.34
MBD3L3A6NE82 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 ST13P19-201ENST00000442505 1124 ntBASIC12.93□□□□□ -0.34
MBD3L3A6NE82 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 MEG3_2.1-201ENST00000611456 105 ntBASIC12.93□□□□□ -0.34
MBD3L3A6NE82 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 TBC1D3J-201ENST00000620719 1426 ntBASIC12.93□□□□□ -0.34
MBD3L3A6NE82 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 AJ011931.1-201ENST00000618749 2492 ntBASIC12.93□□□□□ -0.34
MBD3L3A6NE82 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 AC126177.1-201ENST00000547829 2218 ntBASIC12.92□□□□□ -0.34
MBD3L3A6NE82 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 GGCT-203ENST00000409144 836 ntTSL 2 BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 MIR6769A-201ENST00000617340 73 ntBASIC12.92□□□□□ -0.34
MBD3L3A6NE82 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.92□□□□□ -0.34
MBD3L3A6NE82 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms