Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 AL136309.1-201ENST00000403917 691 ntBASIC14.13□□□□□ -0.15
LRIT2A6NDA9 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 PUDPP3-201ENST00000445368 636 ntBASIC14.13□□□□□ -0.15
LRIT2A6NDA9 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 AC239800.4-201ENST00000603712 296 ntBASIC14.13□□□□□ -0.15
LRIT2A6NDA9 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 KRT8P4-201ENST00000509735 1454 ntBASIC14.12□□□□□ -0.15
LRIT2A6NDA9 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 CNN2P10-201ENST00000443067 918 ntBASIC14.12□□□□□ -0.15
LRIT2A6NDA9 CHMP1AP1-201ENST00000445563 662 ntBASIC14.12□□□□□ -0.15
LRIT2A6NDA9 AL355994.2-201ENST00000447882 704 ntBASIC14.12□□□□□ -0.15
LRIT2A6NDA9 CSF2RBP1-201ENST00000447905 391 ntBASIC14.12□□□□□ -0.15
LRIT2A6NDA9 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 AC103988.2-201ENST00000561804 725 ntBASIC14.12□□□□□ -0.15
LRIT2A6NDA9 AP005482.1-201ENST00000563722 1273 ntBASIC14.12□□□□□ -0.15
LRIT2A6NDA9 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 AC015802.1-201ENST00000588104 1449 ntBASIC14.12□□□□□ -0.15
LRIT2A6NDA9 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 AC015688.4-201ENST00000580780 1647 ntBASIC14.12□□□□□ -0.15
LRIT2A6NDA9 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
LRIT2A6NDA9 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 AC139712.1-201ENST00000378256 1875 ntBASIC14.11□□□□□ -0.15
LRIT2A6NDA9 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 AC119751.2-201ENST00000504529 210 ntBASIC14.11□□□□□ -0.15
LRIT2A6NDA9 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.11□□□□□ -0.15
LRIT2A6NDA9 PPY2P-201ENST00000582808 702 ntBASIC14.11□□□□□ -0.15
LRIT2A6NDA9 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms