Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 AL033527.5-202ENST00000641632 1098 ntBASIC16.24■□□□□ 0.19
CCDC66A2RUB6 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 AC004899.2-201ENST00000622993 3860 ntBASIC16.23■□□□□ 0.19
CCDC66A2RUB6 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 AC012508.2-201ENST00000567613 1472 ntBASIC16.23■□□□□ 0.19
CCDC66A2RUB6 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 AC130686.1-201ENST00000622936 2466 ntBASIC16.23■□□□□ 0.19
CCDC66A2RUB6 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 AC015922.1-201ENST00000421102 1152 ntBASIC16.23■□□□□ 0.19
CCDC66A2RUB6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 AL512356.2-201ENST00000546955 174 ntBASIC16.23■□□□□ 0.19
CCDC66A2RUB6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 AC134684.3-201ENST00000641758 218 ntBASIC16.23■□□□□ 0.19
CCDC66A2RUB6 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 AC097359.2-201ENST00000604992 2389 ntBASIC16.23■□□□□ 0.19
CCDC66A2RUB6 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.23■□□□□ 0.19
CCDC66A2RUB6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC66A2RUB6 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 CTBP1-AS2-206ENST00000581398 5652 ntBASIC16.22■□□□□ 0.19
CCDC66A2RUB6 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 AC104457.1-201ENST00000401024 814 ntBASIC16.22■□□□□ 0.19
CCDC66A2RUB6 KRT18P64-201ENST00000434946 1219 ntBASIC16.22■□□□□ 0.19
CCDC66A2RUB6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 AL691403.2-201ENST00000618460 490 ntBASIC16.22■□□□□ 0.19
CCDC66A2RUB6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms