Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
HFM1A2PYH4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
HFM1A2PYH4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC21.57■■□□□ 1.04
HFM1A2PYH4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HFM1A2PYH4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC21.57■■□□□ 1.04
HFM1A2PYH4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
HFM1A2PYH4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
HFM1A2PYH4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
HFM1A2PYH4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
HFM1A2PYH4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HFM1A2PYH4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HFM1A2PYH4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HFM1A2PYH4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HFM1A2PYH4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HFM1A2PYH4 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC21.56■■□□□ 1.04
HFM1A2PYH4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HFM1A2PYH4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HFM1A2PYH4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC21.56■■□□□ 1.04
HFM1A2PYH4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HFM1A2PYH4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
HFM1A2PYH4 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HFM1A2PYH4 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC21.56■■□□□ 1.04
HFM1A2PYH4 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC21.56■■□□□ 1.04
HFM1A2PYH4 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC21.56■■□□□ 1.04
HFM1A2PYH4 HINT2P1-201ENST00000419438 481 ntBASIC21.56■■□□□ 1.04
HFM1A2PYH4 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC21.56■■□□□ 1.04
HFM1A2PYH4 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC21.56■■□□□ 1.04
HFM1A2PYH4 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC21.56■■□□□ 1.04
HFM1A2PYH4 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC21.56■■□□□ 1.04
HFM1A2PYH4 RN7SL277P-201ENST00000481521 288 ntBASIC21.56■■□□□ 1.04
HFM1A2PYH4 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
HFM1A2PYH4 MIR3677-201ENST00000578964 60 ntBASIC21.56■■□□□ 1.04
HFM1A2PYH4 NAT9-211ENST00000580632 799 ntTSL 3 BASIC21.56■■□□□ 1.04
HFM1A2PYH4 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HFM1A2PYH4 AL591471.1-201ENST00000621855 229 ntBASIC21.56■■□□□ 1.04
HFM1A2PYH4 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC21.56■■□□□ 1.04
HFM1A2PYH4 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC21.56■■□□□ 1.04
HFM1A2PYH4 AC015909.3-201ENST00000572855 1794 ntBASIC21.56■■□□□ 1.04
HFM1A2PYH4 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
HFM1A2PYH4 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC21.56■■□□□ 1.04
HFM1A2PYH4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HFM1A2PYH4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HFM1A2PYH4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC21.56■■□□□ 1.04
HFM1A2PYH4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
HFM1A2PYH4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HFM1A2PYH4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
HFM1A2PYH4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HFM1A2PYH4 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC21.56■■□□□ 1.04
HFM1A2PYH4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HFM1A2PYH4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
HFM1A2PYH4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC21.56■■□□□ 1.04
HFM1A2PYH4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HFM1A2PYH4 AC103702.1-201ENST00000548801 2630 ntBASIC21.56■■□□□ 1.04
HFM1A2PYH4 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC21.56■■□□□ 1.04
HFM1A2PYH4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HFM1A2PYH4 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HFM1A2PYH4 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HFM1A2PYH4 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC21.55■■□□□ 1.04
HFM1A2PYH4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HFM1A2PYH4 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC21.55■■□□□ 1.04
HFM1A2PYH4 RN7SL258P-201ENST00000478664 300 ntBASIC21.55■■□□□ 1.04
HFM1A2PYH4 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HFM1A2PYH4 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC21.55■■□□□ 1.04
HFM1A2PYH4 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC21.55■■□□□ 1.04
HFM1A2PYH4 AL133499.1-201ENST00000596207 608 ntBASIC21.55■■□□□ 1.04
HFM1A2PYH4 AC021016.3-201ENST00000608367 477 ntBASIC21.55■■□□□ 1.04
HFM1A2PYH4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HFM1A2PYH4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
HFM1A2PYH4 AC106881.1-201ENST00000605849 3329 ntBASIC21.55■■□□□ 1.04
HFM1A2PYH4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HFM1A2PYH4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HFM1A2PYH4 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HFM1A2PYH4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC21.55■■□□□ 1.04
HFM1A2PYH4 KRT8P31-201ENST00000504812 1408 ntBASIC21.55■■□□□ 1.04
HFM1A2PYH4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HFM1A2PYH4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC21.55■■□□□ 1.04
HFM1A2PYH4 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC21.55■■□□□ 1.04
HFM1A2PYH4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
HFM1A2PYH4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HFM1A2PYH4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HFM1A2PYH4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HFM1A2PYH4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HFM1A2PYH4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
HFM1A2PYH4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC21.55■■□□□ 1.04
HFM1A2PYH4 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC21.55■■□□□ 1.04
HFM1A2PYH4 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HFM1A2PYH4 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HFM1A2PYH4 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HFM1A2PYH4 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC21.55■■□□□ 1.04
HFM1A2PYH4 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HFM1A2PYH4 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
HFM1A2PYH4 GGCT-203ENST00000409144 836 ntTSL 2 BASIC21.55■■□□□ 1.04
HFM1A2PYH4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC21.55■■□□□ 1.04
HFM1A2PYH4 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC21.55■■□□□ 1.04
HFM1A2PYH4 NDUFS6P1-201ENST00000485187 316 ntBASIC21.55■■□□□ 1.04
HFM1A2PYH4 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC21.55■■□□□ 1.04
HFM1A2PYH4 RTN3P1-201ENST00000536295 711 ntBASIC21.55■■□□□ 1.04
HFM1A2PYH4 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HFM1A2PYH4 CENPX-208ENST00000584347 799 ntTSL 2 BASIC21.55■■□□□ 1.04
HFM1A2PYH4 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms