Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 FAM90A21P-201ENST00000510875 1396 ntBASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 FAM90A15P-201ENST00000514465 1395 ntBASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 FAM90A6P-201ENST00000515148 1394 ntBASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 FAM90A16P-201ENST00000526662 1395 ntBASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 FAM90A9P-201ENST00000527940 1395 ntBASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 FAM90A5P-201ENST00000528738 1395 ntBASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 FAM90A14P-201ENST00000530386 1395 ntBASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 FAM90A13P-201ENST00000534703 1395 ntBASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 AC092573.1-201ENST00000433054 884 ntBASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 SLC25A15P3-201ENST00000505530 290 ntBASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 KRT18P37-201ENST00000520711 1282 ntBASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 F11R-204ENST00000537746 1245 ntTSL 2 BASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 VENTXP3-201ENST00000546480 773 ntBASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC23.91■■□□□ 1.42
BIVM-ERCC5R4GMW8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
BIVM-ERCC5R4GMW8 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
BIVM-ERCC5R4GMW8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
BIVM-ERCC5R4GMW8 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
BIVM-ERCC5R4GMW8 STK24P1-201ENST00000455035 1291 ntBASIC23.9■■□□□ 1.42
BIVM-ERCC5R4GMW8 TPT1P11-201ENST00000458482 498 ntBASIC23.9■■□□□ 1.42
BIVM-ERCC5R4GMW8 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
BIVM-ERCC5R4GMW8 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC23.9■■□□□ 1.42
BIVM-ERCC5R4GMW8 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
BIVM-ERCC5R4GMW8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
BIVM-ERCC5R4GMW8 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC23.9■■□□□ 1.42
BIVM-ERCC5R4GMW8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
BIVM-ERCC5R4GMW8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
BIVM-ERCC5R4GMW8 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
BIVM-ERCC5R4GMW8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC23.9■■□□□ 1.42
BIVM-ERCC5R4GMW8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC23.89■■□□□ 1.42
BIVM-ERCC5R4GMW8 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC23.89■■□□□ 1.42
BIVM-ERCC5R4GMW8 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
BIVM-ERCC5R4GMW8 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
BIVM-ERCC5R4GMW8 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC23.89■■□□□ 1.42
BIVM-ERCC5R4GMW8 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
BIVM-ERCC5R4GMW8 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC23.89■■□□□ 1.42
BIVM-ERCC5R4GMW8 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
BIVM-ERCC5R4GMW8 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC23.89■■□□□ 1.42
BIVM-ERCC5R4GMW8 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC23.89■■□□□ 1.42
BIVM-ERCC5R4GMW8 MIR6746-201ENST00000620971 63 ntBASIC23.89■■□□□ 1.42
BIVM-ERCC5R4GMW8 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
BIVM-ERCC5R4GMW8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
BIVM-ERCC5R4GMW8 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
BIVM-ERCC5R4GMW8 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
BIVM-ERCC5R4GMW8 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 EIF5AP2-201ENST00000585668 1047 ntBASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 ZNF436-AS1-201ENST00000335648 2547 ntBASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 HMGB1P24-201ENST00000611897 328 ntBASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 ETV2-207ENST00000619399 994 ntTSL 5 BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
BIVM-ERCC5R4GMW8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
BIVM-ERCC5R4GMW8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC23.87■■□□□ 1.41
BIVM-ERCC5R4GMW8 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
BIVM-ERCC5R4GMW8 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
BIVM-ERCC5R4GMW8 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
BIVM-ERCC5R4GMW8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms