Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.07■□□□□ 0
RAI2Q9Y5P3 RN7SL713P-201ENST00000582127 302 ntBASIC15.07■□□□□ 0
RAI2Q9Y5P3 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.07■□□□□ 0
RAI2Q9Y5P3 AC073413.1-201ENST00000603927 732 ntBASIC15.07■□□□□ 0
RAI2Q9Y5P3 AC091271.1-201ENST00000611877 1162 ntBASIC15.07■□□□□ 0
RAI2Q9Y5P3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAI2Q9Y5P3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RAI2Q9Y5P3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
RAI2Q9Y5P3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.07■□□□□ 0
RAI2Q9Y5P3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RAI2Q9Y5P3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAI2Q9Y5P3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.07■□□□□ 0
RAI2Q9Y5P3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.07■□□□□ 0
RAI2Q9Y5P3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAI2Q9Y5P3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.07■□□□□ 0
RAI2Q9Y5P3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.07■□□□□ 0
RAI2Q9Y5P3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAI2Q9Y5P3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.07■□□□□ 0
RAI2Q9Y5P3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
RAI2Q9Y5P3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.06■□□□□ 0
RAI2Q9Y5P3 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 FXNP2-201ENST00000411625 547 ntBASIC15.06■□□□□ 0
RAI2Q9Y5P3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.06■□□□□ 0
RAI2Q9Y5P3 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.06■□□□□ 0
RAI2Q9Y5P3 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.06■□□□□ 0
RAI2Q9Y5P3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.06■□□□□ 0
RAI2Q9Y5P3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.06■□□□□ 0
RAI2Q9Y5P3 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.06■□□□□ 0
RAI2Q9Y5P3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.06■□□□□ 0
RAI2Q9Y5P3 AC131206.1-201ENST00000538078 1211 ntBASIC15.06■□□□□ 0
RAI2Q9Y5P3 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.06■□□□□ 0
RAI2Q9Y5P3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
RAI2Q9Y5P3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
RAI2Q9Y5P3 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.06■□□□□ 0
RAI2Q9Y5P3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.06■□□□□ 0
RAI2Q9Y5P3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.06■□□□□ 0
RAI2Q9Y5P3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
RAI2Q9Y5P3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.06■□□□□ 0
RAI2Q9Y5P3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.06■□□□□ 0
RAI2Q9Y5P3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAI2Q9Y5P3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.06■□□□□ 0
RAI2Q9Y5P3 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.06■□□□□ 0
RAI2Q9Y5P3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
RAI2Q9Y5P3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAI2Q9Y5P3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
RAI2Q9Y5P3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RAI2Q9Y5P3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAI2Q9Y5P3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RAI2Q9Y5P3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
RAI2Q9Y5P3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.05■□□□□ 0
RAI2Q9Y5P3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RAI2Q9Y5P3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.05■□□□□ 0
RAI2Q9Y5P3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.05■□□□□ 0
RAI2Q9Y5P3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAI2Q9Y5P3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
RAI2Q9Y5P3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.05■□□□□ -0
RAI2Q9Y5P3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
RAI2Q9Y5P3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RAI2Q9Y5P3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
RAI2Q9Y5P3 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAI2Q9Y5P3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RAI2Q9Y5P3 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.05■□□□□ -0
RAI2Q9Y5P3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.05■□□□□ -0
RAI2Q9Y5P3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAI2Q9Y5P3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.05■□□□□ -0
RAI2Q9Y5P3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.05■□□□□ -0
RAI2Q9Y5P3 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.05■□□□□ -0
RAI2Q9Y5P3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.05■□□□□ -0
RAI2Q9Y5P3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RAI2Q9Y5P3 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.05■□□□□ -0
RAI2Q9Y5P3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RAI2Q9Y5P3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.05■□□□□ -0
RAI2Q9Y5P3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RAI2Q9Y5P3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RAI2Q9Y5P3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms