Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 CICP12-201ENST00000455801 843 ntBASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 EEF1DP1-201ENST00000585891 896 ntBASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 AC010328.2-201ENST00000597698 1111 ntBASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 AC009542.2-202ENST00000619004 1067 ntBASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 AC007191.1-201ENST00000623179 2995 ntBASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 AC079178.1-201ENST00000420915 656 ntBASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 AL359881.2-201ENST00000602973 570 ntBASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHA4Q9UN74 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 AC023908.3-201ENST00000564211 3047 ntBASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 BX640514.1-201ENST00000583223 1918 ntBASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 MIR326-201ENST00000362220 95 ntBASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 AL583810.1-201ENST00000553344 1045 ntBASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 AC244157.2-201ENST00000616239 1006 ntBASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 AC027601.3-201ENST00000622907 509 ntBASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms