Protein–RNA interactions for Protein: Q9P2J3

KLHL9, Kelch-like protein 9, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL9Q9P2J3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 REXO1L4P-201ENST00000605109 1937 ntBASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 RNU1-114P-201ENST00000365297 166 ntBASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 ACTBP8-201ENST00000403258 1108 ntBASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 BOLA2P3-201ENST00000404566 256 ntBASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 AP001889.1-201ENST00000525414 633 ntBASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 LRRC59-203ENST00000576448 1531 ntBASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 KRT8P14-201ENST00000414254 1442 ntBASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 CICP14-201ENST00000629111 2732 ntBASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
KLHL9Q9P2J3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 AC018665.1-201ENST00000622927 1362 ntBASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 BEND3P1-201ENST00000421591 1944 ntBASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 AC234783.1-201ENST00000441761 496 ntBASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.61□□□□□ -0.23
KLHL9Q9P2J3 AL603764.1-201ENST00000636452 321 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms