Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.49■□□□□ 0.23
VTA1Q9NP79 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VTA1Q9NP79 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.49■□□□□ 0.23
VTA1Q9NP79 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.49■□□□□ 0.23
VTA1Q9NP79 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTA1Q9NP79 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VTA1Q9NP79 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VTA1Q9NP79 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.49■□□□□ 0.23
VTA1Q9NP79 PGAM1P5-201ENST00000548011 764 ntBASIC16.49■□□□□ 0.23
VTA1Q9NP79 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTA1Q9NP79 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
VTA1Q9NP79 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.49■□□□□ 0.23
VTA1Q9NP79 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.49■□□□□ 0.23
VTA1Q9NP79 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.49■□□□□ 0.23
VTA1Q9NP79 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
VTA1Q9NP79 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTA1Q9NP79 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
VTA1Q9NP79 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
VTA1Q9NP79 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
VTA1Q9NP79 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.49■□□□□ 0.23
VTA1Q9NP79 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTA1Q9NP79 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VTA1Q9NP79 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
VTA1Q9NP79 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTA1Q9NP79 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
VTA1Q9NP79 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTA1Q9NP79 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTA1Q9NP79 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.49■□□□□ 0.23
VTA1Q9NP79 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
VTA1Q9NP79 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.49■□□□□ 0.23
VTA1Q9NP79 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTA1Q9NP79 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTA1Q9NP79 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VTA1Q9NP79 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.48■□□□□ 0.23
VTA1Q9NP79 KRT18P9-201ENST00000604826 1300 ntBASIC16.48■□□□□ 0.23
VTA1Q9NP79 AC074138.1-201ENST00000611182 1303 ntBASIC16.48■□□□□ 0.23
VTA1Q9NP79 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.48■□□□□ 0.23
VTA1Q9NP79 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VTA1Q9NP79 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
VTA1Q9NP79 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
VTA1Q9NP79 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
VTA1Q9NP79 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.48■□□□□ 0.23
VTA1Q9NP79 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
VTA1Q9NP79 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VTA1Q9NP79 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VTA1Q9NP79 RNA5SP359-201ENST00000364838 113 ntBASIC16.48■□□□□ 0.23
VTA1Q9NP79 BANF1P3-201ENST00000412556 261 ntBASIC16.48■□□□□ 0.23
VTA1Q9NP79 AC078991.1-201ENST00000437297 610 ntBASIC16.48■□□□□ 0.23
VTA1Q9NP79 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.48■□□□□ 0.23
VTA1Q9NP79 AP000358.1-201ENST00000456260 156 ntBASIC16.48■□□□□ 0.23
VTA1Q9NP79 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VTA1Q9NP79 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VTA1Q9NP79 NPM1P43-201ENST00000558669 786 ntBASIC16.48■□□□□ 0.23
VTA1Q9NP79 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
VTA1Q9NP79 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.48■□□□□ 0.23
VTA1Q9NP79 AC138894.2-201ENST00000602838 371 ntBASIC16.48■□□□□ 0.23
VTA1Q9NP79 AP003419.4-201ENST00000616071 517 ntBASIC16.48■□□□□ 0.23
VTA1Q9NP79 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.48■□□□□ 0.23
VTA1Q9NP79 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VTA1Q9NP79 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
VTA1Q9NP79 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VTA1Q9NP79 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.48■□□□□ 0.23
VTA1Q9NP79 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VTA1Q9NP79 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
VTA1Q9NP79 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
VTA1Q9NP79 AC138035.3-201ENST00000622706 2791 ntBASIC16.48■□□□□ 0.23
VTA1Q9NP79 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.48■□□□□ 0.23
VTA1Q9NP79 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.48■□□□□ 0.23
VTA1Q9NP79 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.48■□□□□ 0.23
VTA1Q9NP79 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
VTA1Q9NP79 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
VTA1Q9NP79 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VTA1Q9NP79 CICP23-201ENST00000605013 2741 ntBASIC16.47■□□□□ 0.23
VTA1Q9NP79 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VTA1Q9NP79 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.47■□□□□ 0.23
VTA1Q9NP79 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.47■□□□□ 0.23
VTA1Q9NP79 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTA1Q9NP79 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VTA1Q9NP79 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.47■□□□□ 0.23
VTA1Q9NP79 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.47■□□□□ 0.23
VTA1Q9NP79 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTA1Q9NP79 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTA1Q9NP79 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTA1Q9NP79 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTA1Q9NP79 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTA1Q9NP79 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
VTA1Q9NP79 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.47■□□□□ 0.23
VTA1Q9NP79 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.47■□□□□ 0.23
VTA1Q9NP79 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTA1Q9NP79 AL583805.1-201ENST00000391389 531 ntBASIC16.47■□□□□ 0.23
VTA1Q9NP79 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.47■□□□□ 0.23
VTA1Q9NP79 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.47■□□□□ 0.23
VTA1Q9NP79 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.47■□□□□ 0.23
VTA1Q9NP79 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.47■□□□□ 0.23
VTA1Q9NP79 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VTA1Q9NP79 RPSAP15-201ENST00000448168 861 ntBASIC16.47■□□□□ 0.23
VTA1Q9NP79 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.47■□□□□ 0.23
VTA1Q9NP79 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VTA1Q9NP79 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.47■□□□□ 0.23
VTA1Q9NP79 AL031713.1-201ENST00000564813 661 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms