Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CDH20Q9HBT6 AL031595.1-201ENST00000623969 4709 ntBASIC13.08□□□□□ -0.31
CDH20Q9HBT6 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CDH20Q9HBT6 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.08□□□□□ -0.31
CDH20Q9HBT6 LINC00528-201ENST00000600723 2160 ntBASIC13.08□□□□□ -0.31
CDH20Q9HBT6 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 CICP14-201ENST00000629111 2732 ntBASIC13.08□□□□□ -0.32
CDH20Q9HBT6 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 FO681548.1-201ENST00000455617 1132 ntBASIC13.08□□□□□ -0.32
CDH20Q9HBT6 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 AC132938.4-201ENST00000623835 848 ntBASIC13.08□□□□□ -0.32
CDH20Q9HBT6 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 AL138709.1-201ENST00000614840 1693 ntBASIC13.08□□□□□ -0.32
CDH20Q9HBT6 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDH20Q9HBT6 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 CROCCP4-201ENST00000457096 498 ntBASIC13.07□□□□□ -0.32
CDH20Q9HBT6 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms