Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RBM39-205ENST00000397370 612 ntTSL 2 BASIC9.9□□□□□ -0.82
LITAFQ99732 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
LITAFQ99732 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC9.9□□□□□ -0.82
LITAFQ99732 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC9.9□□□□□ -0.82
LITAFQ99732 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
LITAFQ99732 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC9.9□□□□□ -0.82
LITAFQ99732 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC9.9□□□□□ -0.82
LITAFQ99732 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC9.9□□□□□ -0.82
LITAFQ99732 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC9.9□□□□□ -0.83
LITAFQ99732 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LITAFQ99732 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC9.9□□□□□ -0.83
LITAFQ99732 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LITAFQ99732 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC9.9□□□□□ -0.83
LITAFQ99732 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC9.9□□□□□ -0.83
LITAFQ99732 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LITAFQ99732 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC9.9□□□□□ -0.83
LITAFQ99732 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC9.9□□□□□ -0.83
LITAFQ99732 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
LITAFQ99732 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC9.9□□□□□ -0.83
LITAFQ99732 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
LITAFQ99732 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LITAFQ99732 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC9.89□□□□□ -0.83
LITAFQ99732 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC9.89□□□□□ -0.83
LITAFQ99732 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC9.89□□□□□ -0.83
LITAFQ99732 Z97205.2-201ENST00000564697 1639 ntBASIC9.89□□□□□ -0.83
LITAFQ99732 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC9.89□□□□□ -0.83
LITAFQ99732 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
LITAFQ99732 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
LITAFQ99732 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC9.89□□□□□ -0.83
LITAFQ99732 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC9.89□□□□□ -0.83
LITAFQ99732 DDC-214ENST00000622873 1839 ntTSL 3 BASIC9.89□□□□□ -0.83
LITAFQ99732 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
LITAFQ99732 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
LITAFQ99732 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC9.89□□□□□ -0.83
LITAFQ99732 AL355306.1-201ENST00000415580 579 ntBASIC9.89□□□□□ -0.83
LITAFQ99732 AC015922.1-201ENST00000421102 1152 ntBASIC9.89□□□□□ -0.83
LITAFQ99732 AC098831.1-202ENST00000438821 336 ntBASIC9.89□□□□□ -0.83
LITAFQ99732 AC004066.1-201ENST00000502488 802 ntBASIC9.89□□□□□ -0.83
LITAFQ99732 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC9.89□□□□□ -0.83
LITAFQ99732 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC9.89□□□□□ -0.83
LITAFQ99732 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC9.89□□□□□ -0.83
LITAFQ99732 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC9.89□□□□□ -0.83
LITAFQ99732 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC9.89□□□□□ -0.83
LITAFQ99732 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC9.89□□□□□ -0.83
LITAFQ99732 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC9.89□□□□□ -0.83
LITAFQ99732 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC9.89□□□□□ -0.83
LITAFQ99732 AC106730.1-201ENST00000566722 1090 ntBASIC9.89□□□□□ -0.83
LITAFQ99732 AC087388.1-201ENST00000571370 1112 ntBASIC9.89□□□□□ -0.83
LITAFQ99732 TBCB-205ENST00000585746 875 ntTSL 3 BASIC9.89□□□□□ -0.83
LITAFQ99732 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC9.89□□□□□ -0.83
LITAFQ99732 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC9.89□□□□□ -0.83
LITAFQ99732 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC9.89□□□□□ -0.83
LITAFQ99732 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
LITAFQ99732 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC9.89□□□□□ -0.83
LITAFQ99732 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
LITAFQ99732 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC9.89□□□□□ -0.83
LITAFQ99732 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
LITAFQ99732 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
LITAFQ99732 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC9.89□□□□□ -0.83
LITAFQ99732 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 DMBT1P1-203ENST00000636837 4628 ntBASIC9.89□□□□□ -0.83
LITAFQ99732 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LITAFQ99732 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms