Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 AL136309.1-201ENST00000403917 691 ntBASIC13.22□□□□□ -0.29
APH1AQ96BI3 RN7SKP175-201ENST00000408472 289 ntBASIC13.22□□□□□ -0.29
APH1AQ96BI3 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 C2orf69P2-201ENST00000562032 1123 ntBASIC13.22□□□□□ -0.29
APH1AQ96BI3 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1AQ96BI3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APH1AQ96BI3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.21□□□□□ -0.29
APH1AQ96BI3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.21□□□□□ -0.29
APH1AQ96BI3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1AQ96BI3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1AQ96BI3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1AQ96BI3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.21□□□□□ -0.29
APH1AQ96BI3 AC099063.4-201ENST00000641099 1602 ntBASIC13.21□□□□□ -0.29
APH1AQ96BI3 LINC01101-201ENST00000622953 1884 ntBASIC13.21□□□□□ -0.29
APH1AQ96BI3 AC020910.5-201ENST00000623668 1865 ntBASIC13.21□□□□□ -0.29
APH1AQ96BI3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.21□□□□□ -0.29
APH1AQ96BI3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APH1AQ96BI3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1AQ96BI3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1AQ96BI3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1AQ96BI3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
APH1AQ96BI3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1AQ96BI3 RN7SKP230-201ENST00000365642 335 ntBASIC13.21□□□□□ -0.29
APH1AQ96BI3 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.21□□□□□ -0.29
APH1AQ96BI3 AC004945.1-201ENST00000416738 983 ntBASIC13.21□□□□□ -0.29
APH1AQ96BI3 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.21□□□□□ -0.29
APH1AQ96BI3 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.21□□□□□ -0.29
APH1AQ96BI3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APH1AQ96BI3 MIR4741-201ENST00000579822 90 ntBASIC13.21□□□□□ -0.29
APH1AQ96BI3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.21□□□□□ -0.29
APH1AQ96BI3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.21□□□□□ -0.29
APH1AQ96BI3 AC009542.2-202ENST00000619004 1067 ntBASIC13.21□□□□□ -0.29
APH1AQ96BI3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1AQ96BI3 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1AQ96BI3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1AQ96BI3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APH1AQ96BI3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1AQ96BI3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1AQ96BI3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APH1AQ96BI3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1AQ96BI3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.21□□□□□ -0.29
APH1AQ96BI3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
APH1AQ96BI3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APH1AQ96BI3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
APH1AQ96BI3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APH1AQ96BI3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APH1AQ96BI3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APH1AQ96BI3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.21□□□□□ -0.3
APH1AQ96BI3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
APH1AQ96BI3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
APH1AQ96BI3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APH1AQ96BI3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APH1AQ96BI3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
APH1AQ96BI3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.21□□□□□ -0.3
APH1AQ96BI3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms