Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS33AQ96AX1 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS33AQ96AX1 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS33AQ96AX1 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS33AQ96AX1 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
VPS33AQ96AX1 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS33AQ96AX1 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VPS33AQ96AX1 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS33AQ96AX1 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VPS33AQ96AX1 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.38□□□□□ -0.11
VPS33AQ96AX1 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.38□□□□□ -0.11
VPS33AQ96AX1 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
VPS33AQ96AX1 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 PEG13-201ENST00000631594 5667 ntBASIC14.37□□□□□ -0.11
VPS33AQ96AX1 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 AC016397.2-201ENST00000624848 1985 ntBASIC14.37□□□□□ -0.11
VPS33AQ96AX1 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 TSEN15P1-201ENST00000423257 515 ntBASIC14.37□□□□□ -0.11
VPS33AQ96AX1 AC092580.3-201ENST00000430932 139 ntBASIC14.37□□□□□ -0.11
VPS33AQ96AX1 AL353779.1-201ENST00000434793 351 ntBASIC14.37□□□□□ -0.11
VPS33AQ96AX1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 DNAJB3-202ENST00000449667 1266 ntBASIC14.37□□□□□ -0.11
VPS33AQ96AX1 AC004967.1-201ENST00000453589 447 ntBASIC14.37□□□□□ -0.11
VPS33AQ96AX1 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 ZNF890P-202ENST00000530367 1156 ntBASIC14.37□□□□□ -0.11
VPS33AQ96AX1 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 DRD5P1-201ENST00000456605 1438 ntBASIC14.37□□□□□ -0.11
VPS33AQ96AX1 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS33AQ96AX1 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.36□□□□□ -0.11
VPS33AQ96AX1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 AC114501.2-201ENST00000439631 535 ntBASIC14.36□□□□□ -0.11
VPS33AQ96AX1 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 AL589987.1-201ENST00000453380 819 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms