Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 SNHG9-202ENST00000564014 471 ntBASIC13.28□□□□□ -0.28
RFT1Q96AA3 AC015910.1-201ENST00000579400 975 ntBASIC13.28□□□□□ -0.28
RFT1Q96AA3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 AC025048.3-201ENST00000590609 569 ntBASIC13.28□□□□□ -0.28
RFT1Q96AA3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 AC027612.4-201ENST00000605371 583 ntBASIC13.28□□□□□ -0.28
RFT1Q96AA3 AC005702.4-201ENST00000618393 416 ntBASIC13.28□□□□□ -0.28
RFT1Q96AA3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RFT1Q96AA3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RFT1Q96AA3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.27□□□□□ -0.28
RFT1Q96AA3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RFT1Q96AA3 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
RFT1Q96AA3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
RFT1Q96AA3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RFT1Q96AA3 AL591122.2-201ENST00000624125 1853 ntBASIC13.27□□□□□ -0.28
RFT1Q96AA3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RFT1Q96AA3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RFT1Q96AA3 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
RFT1Q96AA3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RFT1Q96AA3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.28
RFT1Q96AA3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
RFT1Q96AA3 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RFT1Q96AA3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RFT1Q96AA3 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RFT1Q96AA3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
RFT1Q96AA3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RFT1Q96AA3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RFT1Q96AA3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RFT1Q96AA3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RFT1Q96AA3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RFT1Q96AA3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RFT1Q96AA3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RFT1Q96AA3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 SPDYE12P-201ENST00000618416 771 ntBASIC13.27□□□□□ -0.29
RFT1Q96AA3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RFT1Q96AA3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RFT1Q96AA3 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RFT1Q96AA3 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RFT1Q96AA3 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RFT1Q96AA3 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RFT1Q96AA3 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RFT1Q96AA3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RFT1Q96AA3 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RFT1Q96AA3 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RFT1Q96AA3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RFT1Q96AA3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RFT1Q96AA3 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
RFT1Q96AA3 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms