Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM54Q969K7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM54Q969K7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM54Q969K7 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM54Q969K7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM54Q969K7 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
TMEM54Q969K7 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.07□□□□□ -0.32
TMEM54Q969K7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
TMEM54Q969K7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 CNN2P10-201ENST00000443067 918 ntBASIC13.07□□□□□ -0.32
TMEM54Q969K7 AL355994.2-201ENST00000447882 704 ntBASIC13.07□□□□□ -0.32
TMEM54Q969K7 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.07□□□□□ -0.32
TMEM54Q969K7 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
TMEM54Q969K7 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM54Q969K7 AC023310.1-201ENST00000554836 735 ntBASIC13.07□□□□□ -0.32
TMEM54Q969K7 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.07□□□□□ -0.32
TMEM54Q969K7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.07□□□□□ -0.32
TMEM54Q969K7 PPY2P-201ENST00000582808 702 ntBASIC13.07□□□□□ -0.32
TMEM54Q969K7 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.07□□□□□ -0.32
TMEM54Q969K7 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.07□□□□□ -0.32
TMEM54Q969K7 KRT8P4-201ENST00000509735 1454 ntBASIC13.07□□□□□ -0.32
TMEM54Q969K7 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TMEM54Q969K7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TMEM54Q969K7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM54Q969K7 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TMEM54Q969K7 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TMEM54Q969K7 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TMEM54Q969K7 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM54Q969K7 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM54Q969K7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM54Q969K7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM54Q969K7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM54Q969K7 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM54Q969K7 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM54Q969K7 ANKRD19P-201ENST00000338192 862 ntBASIC13.06□□□□□ -0.32
TMEM54Q969K7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM54Q969K7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM54Q969K7 MIR1909-201ENST00000411312 80 ntBASIC13.06□□□□□ -0.32
TMEM54Q969K7 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 HOMER2P2-201ENST00000451621 847 ntBASIC13.06□□□□□ -0.32
TMEM54Q969K7 ACA64.2-201ENST00000459014 129 ntBASIC13.06□□□□□ -0.32
TMEM54Q969K7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 AC104989.1-201ENST00000519711 778 ntBASIC13.06□□□□□ -0.32
TMEM54Q969K7 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 SNX29P1-201ENST00000548357 1007 ntBASIC13.06□□□□□ -0.32
TMEM54Q969K7 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM54Q969K7 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM54Q969K7 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM54Q969K7 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM54Q969K7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM54Q969K7 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM54Q969K7 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM54Q969K7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM54Q969K7 AC215219.1-201ENST00000400706 1817 ntBASIC13.06□□□□□ -0.32
TMEM54Q969K7 AC090505.1-201ENST00000430515 1834 ntBASIC13.06□□□□□ -0.32
TMEM54Q969K7 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TMEM54Q969K7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM54Q969K7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms