Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAF3IP1Q8TDR0 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRAF3IP1Q8TDR0 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAF3IP1Q8TDR0 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.58■□□□□ 0.09
TRAF3IP1Q8TDR0 BX640514.1-201ENST00000583223 1918 ntBASIC15.58■□□□□ 0.09
TRAF3IP1Q8TDR0 AC097359.2-201ENST00000604992 2389 ntBASIC15.58■□□□□ 0.09
TRAF3IP1Q8TDR0 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.58■□□□□ 0.09
TRAF3IP1Q8TDR0 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAF3IP1Q8TDR0 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAF3IP1Q8TDR0 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAF3IP1Q8TDR0 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
TRAF3IP1Q8TDR0 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
TRAF3IP1Q8TDR0 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAF3IP1Q8TDR0 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 AC026434.2-201ENST00000506094 1078 ntBASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 CTBP2P3-201ENST00000585629 1255 ntBASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 WFDC1-204ENST00000613603 549 ntBASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 KRT8P35-201ENST00000483942 1338 ntBASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRAF3IP1Q8TDR0 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 AC117489.1-201ENST00000625169 3217 ntBASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 ACTBP8-201ENST00000403258 1108 ntBASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 AC190387.1-201ENST00000551683 408 ntBASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 WASH4P-201ENST00000564273 1246 ntBASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 AC009486.1-201ENST00000569860 813 ntBASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP1Q8TDR0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms