Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 AC026748.1-201ENST00000624349 3251 ntBASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 FO681548.1-201ENST00000455617 1132 ntBASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 AC068587.3-201ENST00000526613 355 ntBASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 MIR5189-201ENST00000577370 114 ntBASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 AC145423.3-201ENST00000615987 467 ntBASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 AL358472.5-202ENST00000641448 1267 ntBASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 SALL4P5-201ENST00000419001 1760 ntBASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 API5-203ENST00000455725 2257 ntTSL 2 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TTC9CQ8N5M4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 AC007686.3-201ENST00000619017 3487 ntBASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms