Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBE3BQ7Z3V4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UBE3BQ7Z3V4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.43■□□□□ 0.54
UBE3BQ7Z3V4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBE3BQ7Z3V4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
UBE3BQ7Z3V4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.43■□□□□ 0.54
UBE3BQ7Z3V4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBE3BQ7Z3V4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.43■□□□□ 0.54
UBE3BQ7Z3V4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
UBE3BQ7Z3V4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBE3BQ7Z3V4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBE3BQ7Z3V4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBE3BQ7Z3V4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 AC139712.1-201ENST00000378256 1875 ntBASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 RN7SKP214-201ENST00000364208 315 ntBASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 AC024681.1-201ENST00000521917 487 ntBASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 RERG-205ENST00000537647 935 ntTSL 2 BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 AC105129.2-201ENST00000559536 390 ntBASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 RN7SL574P-201ENST00000581512 297 ntBASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
UBE3BQ7Z3V4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 AL157791.1-201ENST00000553667 1699 ntBASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 Z97180.1-201ENST00000445173 988 ntBASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 RBM8B-201ENST00000555532 525 ntBASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 AC103988.2-201ENST00000561804 725 ntBASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 AC084346.2-201ENST00000607097 949 ntBASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 AC091812.3-201ENST00000621362 345 ntBASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3BQ7Z3V4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms