Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
OTOP1Q7RTM1 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
OTOP1Q7RTM1 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
OTOP1Q7RTM1 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
OTOP1Q7RTM1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.07■□□□□ 0.32
OTOP1Q7RTM1 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
OTOP1Q7RTM1 INE2-201ENST00000630399 1874 ntBASIC17.07■□□□□ 0.32
OTOP1Q7RTM1 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
OTOP1Q7RTM1 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
OTOP1Q7RTM1 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.07■□□□□ 0.32
OTOP1Q7RTM1 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.07■□□□□ 0.32
OTOP1Q7RTM1 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 AC090502.4-201ENST00000551714 1386 ntBASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 BAK1P1-201ENST00000317045 636 ntBASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 AC024293.1-201ENST00000467930 498 ntBASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 AC006158.1-201ENST00000610661 249 ntBASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 Z98259.2-201ENST00000641583 609 ntBASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 ZBED1P1-201ENST00000502364 1930 ntBASIC17.06■□□□□ 0.32
OTOP1Q7RTM1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 AGAP7P-201ENST00000582299 2062 ntBASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 AGAP14-201ENST00000624701 2060 ntBASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 FAM86KP-201ENST00000509817 987 ntBASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 HKR1-225ENST00000592168 566 ntTSL 4 BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 HPN-206ENST00000597419 1212 ntTSL 5 BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
OTOP1Q7RTM1 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.04■□□□□ 0.32
OTOP1Q7RTM1 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
OTOP1Q7RTM1 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.04■□□□□ 0.32
OTOP1Q7RTM1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
OTOP1Q7RTM1 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
OTOP1Q7RTM1 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
OTOP1Q7RTM1 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
OTOP1Q7RTM1 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.04■□□□□ 0.32
OTOP1Q7RTM1 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.04■□□□□ 0.32
OTOP1Q7RTM1 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
OTOP1Q7RTM1 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
OTOP1Q7RTM1 MIR557-201ENST00000385239 98 ntBASIC17.04■□□□□ 0.32
OTOP1Q7RTM1 HIST2H2BA-201ENST00000412169 381 ntBASIC17.04■□□□□ 0.32
OTOP1Q7RTM1 DDX39AP1-201ENST00000445147 1181 ntBASIC17.04■□□□□ 0.32
OTOP1Q7RTM1 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms