Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 RPL4P6-201ENST00000438116 1304 ntBASIC14.16□□□□□ -0.14
RIF1Q5UIP0 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 KRT8P6-201ENST00000399259 1207 ntBASIC14.16□□□□□ -0.14
RIF1Q5UIP0 PPP1R2P4-201ENST00000424051 595 ntBASIC14.16□□□□□ -0.14
RIF1Q5UIP0 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 CES1P2-201ENST00000566467 1242 ntBASIC14.16□□□□□ -0.14
RIF1Q5UIP0 ACTBP9-201ENST00000587663 1099 ntBASIC14.16□□□□□ -0.14
RIF1Q5UIP0 GGNBP1-204ENST00000613113 887 ntBASIC14.16□□□□□ -0.14
RIF1Q5UIP0 AC005274.1-201ENST00000623460 802 ntBASIC14.16□□□□□ -0.14
RIF1Q5UIP0 AC139713.2-207ENST00000641556 1292 ntBASIC14.16□□□□□ -0.14
RIF1Q5UIP0 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 AL136172.1-201ENST00000598590 1394 ntBASIC14.15□□□□□ -0.14
RIF1Q5UIP0 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.15□□□□□ -0.14
RIF1Q5UIP0 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 LINC00528-201ENST00000600723 2160 ntBASIC14.15□□□□□ -0.14
RIF1Q5UIP0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 HNRNPABP1-201ENST00000406003 734 ntBASIC14.15□□□□□ -0.14
RIF1Q5UIP0 HINT1-205ENST00000508488 703 ntTSL 2 BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 INO80E-209ENST00000567254 625 ntTSL 2 BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 RN7SL300P-201ENST00000582522 318 ntBASIC14.15□□□□□ -0.14
RIF1Q5UIP0 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RIF1Q5UIP0 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
RIF1Q5UIP0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
RIF1Q5UIP0 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.14□□□□□ -0.15
RIF1Q5UIP0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RIF1Q5UIP0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RIF1Q5UIP0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RIF1Q5UIP0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RIF1Q5UIP0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
RIF1Q5UIP0 REXO1L4P-201ENST00000605109 1937 ntBASIC14.14□□□□□ -0.15
RIF1Q5UIP0 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RIF1Q5UIP0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RIF1Q5UIP0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RIF1Q5UIP0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms