Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 MYADML-201ENST00000474610 2147 ntBASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 AC103563.1-201ENST00000429316 123 ntBASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 MIR4472-1-201ENST00000584349 80 ntBASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 AL136982.5-201ENST00000605222 294 ntBASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 AC008536.3-201ENST00000623282 1599 ntBASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 AC006486.2-201ENST00000624246 2199 ntBASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 DUT-207ENST00000559416 635 ntTSL 2 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 MIR4265-201ENST00000582152 99 ntBASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 GAS7-216ENST00000583882 553 ntTSL 5 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 USP39-220ENST00000613444 2161 ntTSL 2 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 NQO2-204ENST00000380454 851 ntTSL 2 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 HYMAI-201ENST00000635591 3347 ntBASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 BX679664.3-201ENST00000414070 555 ntBASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 LINP1-201ENST00000417112 917 ntTSL 2 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 AC113935.1-201ENST00000471722 555 ntBASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 AL590235.1-201ENST00000564650 861 ntBASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC9.63□□□□□ -0.87
VPS13DQ5THJ4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 ZNF436-AS1-201ENST00000335648 2547 ntBASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 GSN-209ENST00000449733 2702 ntTSL 2 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC9.62□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms