Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SAT1-202ENST00000379253 909 ntTSL 2 BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 SAT1-203ENST00000379254 868 ntTSL 3 BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 SCARNA12-201ENST00000459155 270 ntBASIC18.34■□□□□ 0.53
RC3H1Q5TC82 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 SKA2-205ENST00000580541 689 ntTSL 3 BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 AC012073.1-201ENST00000606114 1108 ntBASIC18.34■□□□□ 0.53
RC3H1Q5TC82 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RC3H1Q5TC82 ACE3P-201ENST00000423435 1973 ntBASIC18.33■□□□□ 0.53
RC3H1Q5TC82 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RC3H1Q5TC82 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RC3H1Q5TC82 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.33■□□□□ 0.53
RC3H1Q5TC82 AC136621.1-201ENST00000624017 2304 ntBASIC18.33■□□□□ 0.53
RC3H1Q5TC82 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RC3H1Q5TC82 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RC3H1Q5TC82 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
RC3H1Q5TC82 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
RC3H1Q5TC82 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
RC3H1Q5TC82 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RC3H1Q5TC82 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC18.33■□□□□ 0.53
RC3H1Q5TC82 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RC3H1Q5TC82 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RC3H1Q5TC82 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.33■□□□□ 0.52
RC3H1Q5TC82 BAX-205ENST00000391871 687 ntTSL 5 BASIC18.33■□□□□ 0.52
RC3H1Q5TC82 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC18.33■□□□□ 0.52
RC3H1Q5TC82 GNG10P1-201ENST00000452289 199 ntBASIC18.33■□□□□ 0.52
RC3H1Q5TC82 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC18.33■□□□□ 0.52
RC3H1Q5TC82 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC18.33■□□□□ 0.52
RC3H1Q5TC82 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC18.33■□□□□ 0.52
RC3H1Q5TC82 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC18.33■□□□□ 0.52
RC3H1Q5TC82 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RC3H1Q5TC82 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RC3H1Q5TC82 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RC3H1Q5TC82 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RC3H1Q5TC82 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RC3H1Q5TC82 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 CTBP2P8-201ENST00000422584 1330 ntBASIC18.32■□□□□ 0.52
RC3H1Q5TC82 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 PPP1R2P4-201ENST00000424051 595 ntBASIC18.32■□□□□ 0.52
RC3H1Q5TC82 KRT17P4-201ENST00000429445 819 ntBASIC18.32■□□□□ 0.52
RC3H1Q5TC82 FAU-202ENST00000434372 533 ntTSL 2 BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 RN7SL494P-201ENST00000461517 304 ntBASIC18.32■□□□□ 0.52
RC3H1Q5TC82 RNA5SP406-201ENST00000516106 112 ntBASIC18.32■□□□□ 0.52
RC3H1Q5TC82 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 HELLS-212ENST00000630929 400 ntTSL 5 BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.32■□□□□ 0.52
RC3H1Q5TC82 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 AC015688.4-201ENST00000580780 1647 ntBASIC18.31■□□□□ 0.52
RC3H1Q5TC82 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms