Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 AC092135.3-201ENST00000624151 1846 ntBASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 TCAF2P1-201ENST00000291129 2421 ntBASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 XBP1P1-201ENST00000436573 652 ntBASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 AC019193.1-201ENST00000506678 823 ntBASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.19■□□□□ 0.34
SHROOM1Q2M3G4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 AL035414.1-201ENST00000451327 857 ntBASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 IQSEC3P1-201ENST00000538799 536 ntBASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 AC003686.1-201ENST00000550956 1034 ntBASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM1Q2M3G4 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 AC139712.1-201ENST00000378256 1875 ntBASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 MAGEA5-201ENST00000446757 942 ntBASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 HPN-206ENST00000597419 1212 ntTSL 5 BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 AC138894.2-201ENST00000602838 371 ntBASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 MIR6842-201ENST00000612539 65 ntBASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 AC022532.1-201ENST00000624563 1728 ntBASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms