Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
ATP2B3Q16720 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC18.21■□□□□ 0.5
ATP2B3Q16720 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B3Q16720 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.2■□□□□ 0.5
ATP2B3Q16720 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B3Q16720 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B3Q16720 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B3Q16720 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B3Q16720 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B3Q16720 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B3Q16720 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.2■□□□□ 0.5
ATP2B3Q16720 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B3Q16720 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B3Q16720 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.2■□□□□ 0.5
ATP2B3Q16720 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B3Q16720 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.2■□□□□ 0.5
ATP2B3Q16720 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B3Q16720 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
ATP2B3Q16720 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ATP2B3Q16720 PUDPP3-201ENST00000445368 636 ntBASIC18.2■□□□□ 0.5
ATP2B3Q16720 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC18.2■□□□□ 0.5
ATP2B3Q16720 AKR7A2P1-201ENST00000460134 915 ntBASIC18.2■□□□□ 0.5
ATP2B3Q16720 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC18.2■□□□□ 0.5
ATP2B3Q16720 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.2■□□□□ 0.5
ATP2B3Q16720 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B3Q16720 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B3Q16720 BNIP3P13-201ENST00000599968 566 ntBASIC18.2■□□□□ 0.5
ATP2B3Q16720 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B3Q16720 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
ATP2B3Q16720 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B3Q16720 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B3Q16720 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B3Q16720 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B3Q16720 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B3Q16720 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC18.2■□□□□ 0.5
ATP2B3Q16720 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B3Q16720 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B3Q16720 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC18.2■□□□□ 0.5
ATP2B3Q16720 AC138028.6-201ENST00000616106 1482 ntBASIC18.2■□□□□ 0.5
ATP2B3Q16720 AJ011931.1-201ENST00000618749 2492 ntBASIC18.2■□□□□ 0.5
ATP2B3Q16720 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B3Q16720 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2B3Q16720 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2B3Q16720 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2B3Q16720 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2B3Q16720 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2B3Q16720 FER1L4-210ENST00000615531 5998 ntBASIC18.19■□□□□ 0.5
ATP2B3Q16720 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ATP2B3Q16720 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
ATP2B3Q16720 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
ATP2B3Q16720 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
ATP2B3Q16720 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC18.19■□□□□ 0.5
ATP2B3Q16720 FNTAP2-201ENST00000430308 634 ntBASIC18.19■□□□□ 0.5
ATP2B3Q16720 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.19■□□□□ 0.5
ATP2B3Q16720 CALR4P-201ENST00000431943 946 ntBASIC18.19■□□□□ 0.5
ATP2B3Q16720 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2B3Q16720 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2B3Q16720 BX284668.4-201ENST00000453917 508 ntBASIC18.19■□□□□ 0.5
ATP2B3Q16720 TUBB8P8-201ENST00000458717 1058 ntBASIC18.19■□□□□ 0.5
ATP2B3Q16720 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18.19■□□□□ 0.5
ATP2B3Q16720 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.19■□□□□ 0.5
ATP2B3Q16720 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC18.19■□□□□ 0.5
ATP2B3Q16720 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC18.19■□□□□ 0.5
ATP2B3Q16720 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2B3Q16720 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.19■□□□□ 0.5
ATP2B3Q16720 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.19■□□□□ 0.5
ATP2B3Q16720 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ATP2B3Q16720 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2B3Q16720 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2B3Q16720 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2B3Q16720 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2B3Q16720 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2B3Q16720 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
ATP2B3Q16720 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.19■□□□□ 0.5
ATP2B3Q16720 AC244394.1-201ENST00000435000 1665 ntBASIC18.18■□□□□ 0.5
ATP2B3Q16720 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ATP2B3Q16720 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B3Q16720 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP2B3Q16720 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B3Q16720 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ATP2B3Q16720 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B3Q16720 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ATP2B3Q16720 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B3Q16720 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B3Q16720 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP2B3Q16720 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B3Q16720 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B3Q16720 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC18.18■□□□□ 0.5
ATP2B3Q16720 BCYRN1-201ENST00000418539 200 ntBASIC18.18■□□□□ 0.5
ATP2B3Q16720 KLF2P1-201ENST00000447438 1042 ntBASIC18.18■□□□□ 0.5
ATP2B3Q16720 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP2B3Q16720 CICP12-201ENST00000455801 843 ntBASIC18.18■□□□□ 0.5
ATP2B3Q16720 HIST2H2BC-201ENST00000498492 580 ntBASIC18.18■□□□□ 0.5
ATP2B3Q16720 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B3Q16720 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B3Q16720 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B3Q16720 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B3Q16720 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP2B3Q16720 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP2B3Q16720 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 262.5 ms