Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SNRPFP62306 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SNRPFP62306 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SNRPFP62306 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.09■□□□□ 0.17
SNRPFP62306 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.09■□□□□ 0.17
SNRPFP62306 FAM21FP-201ENST00000426241 1131 ntBASIC16.09■□□□□ 0.17
SNRPFP62306 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.09■□□□□ 0.17
SNRPFP62306 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.09■□□□□ 0.17
SNRPFP62306 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.09■□□□□ 0.17
SNRPFP62306 AC100850.1-201ENST00000506768 649 ntBASIC16.09■□□□□ 0.17
SNRPFP62306 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
SNRPFP62306 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.09■□□□□ 0.17
SNRPFP62306 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.09■□□□□ 0.17
SNRPFP62306 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.09■□□□□ 0.17
SNRPFP62306 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 AC132192.2-201ENST00000596206 1147 ntBASIC16.09■□□□□ 0.17
SNRPFP62306 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.09■□□□□ 0.17
SNRPFP62306 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.09■□□□□ 0.17
SNRPFP62306 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.09■□□□□ 0.17
SNRPFP62306 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 AC006504.5-208ENST00000588784 2401 ntBASIC16.09■□□□□ 0.17
SNRPFP62306 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.09■□□□□ 0.17
SNRPFP62306 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.09■□□□□ 0.17
SNRPFP62306 INTS4P1-203ENST00000641008 3683 ntBASIC16.09■□□□□ 0.17
SNRPFP62306 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.09■□□□□ 0.17
SNRPFP62306 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.09■□□□□ 0.17
SNRPFP62306 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SNRPFP62306 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.09■□□□□ 0.17
SNRPFP62306 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.09■□□□□ 0.17
SNRPFP62306 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.09■□□□□ 0.17
SNRPFP62306 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.09■□□□□ 0.17
SNRPFP62306 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SNRPFP62306 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SNRPFP62306 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.09■□□□□ 0.17
SNRPFP62306 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
SNRPFP62306 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SNRPFP62306 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
SNRPFP62306 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.08■□□□□ 0.17
SNRPFP62306 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
SNRPFP62306 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SNRPFP62306 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SNRPFP62306 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SNRPFP62306 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SNRPFP62306 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SNRPFP62306 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNRPFP62306 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNRPFP62306 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNRPFP62306 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SNRPFP62306 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
SNRPFP62306 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SNRPFP62306 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.08■□□□□ 0.16
SNRPFP62306 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SNRPFP62306 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.08■□□□□ 0.16
SNRPFP62306 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.08■□□□□ 0.16
SNRPFP62306 AC009955.4-201ENST00000597192 544 ntBASIC16.08■□□□□ 0.16
SNRPFP62306 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.08■□□□□ 0.16
SNRPFP62306 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SNRPFP62306 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.08■□□□□ 0.16
SNRPFP62306 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.08■□□□□ 0.16
SNRPFP62306 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNRPFP62306 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNRPFP62306 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNRPFP62306 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNRPFP62306 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SNRPFP62306 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNRPFP62306 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNRPFP62306 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SNRPFP62306 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.08■□□□□ 0.16
SNRPFP62306 RN7SL832P-201ENST00000607781 1756 ntBASIC16.08■□□□□ 0.16
SNRPFP62306 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNRPFP62306 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNRPFP62306 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNRPFP62306 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.07■□□□□ 0.16
SNRPFP62306 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.07■□□□□ 0.16
SNRPFP62306 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
SNRPFP62306 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
SNRPFP62306 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SNRPFP62306 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNRPFP62306 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNRPFP62306 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms