Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.68□□□□□ -0.22
CDC42P60953 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CDC42P60953 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.68□□□□□ -0.22
CDC42P60953 AC022145.2-201ENST00000598203 171 ntBASIC13.68□□□□□ -0.22
CDC42P60953 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
CDC42P60953 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CDC42P60953 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CDC42P60953 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.68□□□□□ -0.22
CDC42P60953 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CDC42P60953 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.68□□□□□ -0.22
CDC42P60953 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CDC42P60953 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CDC42P60953 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.67□□□□□ -0.22
CDC42P60953 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.67□□□□□ -0.22
CDC42P60953 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CDC42P60953 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.67□□□□□ -0.22
CDC42P60953 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CDC42P60953 AC012617.1-204ENST00000586340 2305 ntBASIC13.67□□□□□ -0.22
CDC42P60953 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.67□□□□□ -0.22
CDC42P60953 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CDC42P60953 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CDC42P60953 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CDC42P60953 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CDC42P60953 AL080243.2-201ENST00000418783 582 ntBASIC13.67□□□□□ -0.22
CDC42P60953 FAM58DP-201ENST00000428076 619 ntBASIC13.67□□□□□ -0.22
CDC42P60953 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.67□□□□□ -0.22
CDC42P60953 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CDC42P60953 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.67□□□□□ -0.22
CDC42P60953 KRT18P58-201ENST00000527480 1120 ntBASIC13.67□□□□□ -0.22
CDC42P60953 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.67□□□□□ -0.22
CDC42P60953 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.67□□□□□ -0.22
CDC42P60953 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.67□□□□□ -0.22
CDC42P60953 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.67□□□□□ -0.22
CDC42P60953 AC105339.1-204ENST00000636249 355 ntBASIC13.67□□□□□ -0.22
CDC42P60953 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CDC42P60953 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.67□□□□□ -0.22
CDC42P60953 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CDC42P60953 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.67□□□□□ -0.22
CDC42P60953 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42P60953 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.66□□□□□ -0.22
CDC42P60953 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CDC42P60953 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 CICP20-201ENST00000443330 2801 ntBASIC13.66□□□□□ -0.22
CDC42P60953 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CDC42P60953 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.66□□□□□ -0.22
CDC42P60953 HTR5BP-201ENST00000430851 1154 ntBASIC13.66□□□□□ -0.22
CDC42P60953 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CDC42P60953 SPDYE14P-201ENST00000442619 822 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms