Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.16■□□□□ 0.02
CDH4P55283 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.16■□□□□ 0.02
CDH4P55283 AC103988.2-201ENST00000561804 725 ntBASIC15.16■□□□□ 0.02
CDH4P55283 AC005730.2-201ENST00000564549 1184 ntBASIC15.16■□□□□ 0.02
CDH4P55283 AC007663.3-201ENST00000609632 465 ntBASIC15.16■□□□□ 0.02
CDH4P55283 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.16■□□□□ 0.02
CDH4P55283 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
CDH4P55283 AL023803.2-201ENST00000620080 638 ntBASIC15.16■□□□□ 0.02
CDH4P55283 AL008638.5-201ENST00000623814 1298 ntBASIC15.16■□□□□ 0.02
CDH4P55283 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.16■□□□□ 0.02
CDH4P55283 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.16■□□□□ 0.02
CDH4P55283 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CDH4P55283 AC139712.1-201ENST00000378256 1875 ntBASIC15.16■□□□□ 0.02
CDH4P55283 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CDH4P55283 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH4P55283 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH4P55283 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH4P55283 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH4P55283 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDH4P55283 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH4P55283 KRT8P29-201ENST00000420409 1371 ntBASIC15.15■□□□□ 0.02
CDH4P55283 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH4P55283 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH4P55283 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH4P55283 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH4P55283 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH4P55283 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDH4P55283 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.15■□□□□ 0.02
CDH4P55283 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.15■□□□□ 0.02
CDH4P55283 TUBB8P8-201ENST00000458717 1058 ntBASIC15.15■□□□□ 0.02
CDH4P55283 AC021723.1-201ENST00000486306 515 ntBASIC15.15■□□□□ 0.02
CDH4P55283 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH4P55283 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.15■□□□□ 0.02
CDH4P55283 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH4P55283 AL118558.3-201ENST00000607414 1079 ntBASIC15.15■□□□□ 0.02
CDH4P55283 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH4P55283 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH4P55283 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH4P55283 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH4P55283 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH4P55283 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH4P55283 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH4P55283 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH4P55283 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH4P55283 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH4P55283 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH4P55283 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDH4P55283 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH4P55283 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH4P55283 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDH4P55283 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDH4P55283 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH4P55283 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH4P55283 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH4P55283 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH4P55283 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH4P55283 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
CDH4P55283 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH4P55283 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH4P55283 AL354702.1-201ENST00000442006 1960 ntBASIC15.15■□□□□ 0.02
CDH4P55283 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CDH4P55283 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH4P55283 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CDH4P55283 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH4P55283 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH4P55283 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 MYO15B-237ENST00000642007 4893 ntBASIC15.14■□□□□ 0.01
CDH4P55283 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH4P55283 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 AC244394.1-201ENST00000435000 1665 ntBASIC15.14■□□□□ 0.01
CDH4P55283 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CDH4P55283 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 AC006033.1-201ENST00000440505 426 ntBASIC15.14■□□□□ 0.01
CDH4P55283 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
CDH4P55283 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH4P55283 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms