Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.76□□□□□ -0.05
ZNF140P52738 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.76□□□□□ -0.05
ZNF140P52738 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 SNX18-202ENST00000343017 3140 ntBASIC14.76□□□□□ -0.05
ZNF140P52738 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.76□□□□□ -0.05
ZNF140P52738 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 AC090505.1-201ENST00000430515 1834 ntBASIC14.76□□□□□ -0.05
ZNF140P52738 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.75□□□□□ -0.05
ZNF140P52738 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
ZNF140P52738 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
ZNF140P52738 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
ZNF140P52738 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.75□□□□□ -0.05
ZNF140P52738 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
ZNF140P52738 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 HSPA7-201ENST00000445535 1927 ntBASIC14.75□□□□□ -0.05
ZNF140P52738 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ZNF140P52738 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.75□□□□□ -0.05
ZNF140P52738 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.75□□□□□ -0.05
ZNF140P52738 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
ZNF140P52738 AC010141.1-201ENST00000411585 623 ntBASIC14.75□□□□□ -0.05
ZNF140P52738 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.75□□□□□ -0.05
ZNF140P52738 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.75□□□□□ -0.05
ZNF140P52738 HIST2H2BB-201ENST00000449108 381 ntBASIC14.75□□□□□ -0.05
ZNF140P52738 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.75□□□□□ -0.05
ZNF140P52738 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.75□□□□□ -0.05
ZNF140P52738 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.75□□□□□ -0.05
ZNF140P52738 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.75□□□□□ -0.05
ZNF140P52738 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.75□□□□□ -0.05
ZNF140P52738 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
ZNF140P52738 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
ZNF140P52738 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.75□□□□□ -0.05
ZNF140P52738 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
ZNF140P52738 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF140P52738 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.75□□□□□ -0.05
ZNF140P52738 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.75□□□□□ -0.05
ZNF140P52738 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF140P52738 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
ZNF140P52738 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF140P52738 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF140P52738 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
ZNF140P52738 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF140P52738 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
ZNF140P52738 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.74□□□□□ -0.05
ZNF140P52738 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF140P52738 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF140P52738 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
ZNF140P52738 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF140P52738 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF140P52738 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF140P52738 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF140P52738 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
ZNF140P52738 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF140P52738 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF140P52738 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF140P52738 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF140P52738 AC099336.1-201ENST00000417053 1171 ntBASIC14.74□□□□□ -0.05
ZNF140P52738 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.74□□□□□ -0.05
ZNF140P52738 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
ZNF140P52738 AC022210.1-201ENST00000449856 793 ntBASIC14.74□□□□□ -0.05
ZNF140P52738 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF140P52738 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.74□□□□□ -0.05
ZNF140P52738 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
ZNF140P52738 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF140P52738 AC023310.1-201ENST00000554836 735 ntBASIC14.74□□□□□ -0.05
ZNF140P52738 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.74□□□□□ -0.05
ZNF140P52738 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.74□□□□□ -0.05
ZNF140P52738 AC008825.2-201ENST00000603374 718 ntBASIC14.74□□□□□ -0.05
ZNF140P52738 MIR6074-201ENST00000612054 107 ntBASIC14.74□□□□□ -0.05
ZNF140P52738 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
ZNF140P52738 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms