Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.68■□□□□ 0.1
GRIK1P39086 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
GRIK1P39086 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.68■□□□□ 0.1
GRIK1P39086 ZNF767P-206ENST00000513792 565 ntBASIC15.68■□□□□ 0.1
GRIK1P39086 AC126915.1-201ENST00000522847 1038 ntBASIC15.68■□□□□ 0.1
GRIK1P39086 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.68■□□□□ 0.1
GRIK1P39086 AC100827.2-201ENST00000563214 1194 ntBASIC15.68■□□□□ 0.1
GRIK1P39086 DUX4L46-201ENST00000566845 751 ntBASIC15.68■□□□□ 0.1
GRIK1P39086 AC103810.3-201ENST00000583567 96 ntBASIC15.68■□□□□ 0.1
GRIK1P39086 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.68■□□□□ 0.1
GRIK1P39086 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
GRIK1P39086 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GRIK1P39086 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GRIK1P39086 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
GRIK1P39086 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GRIK1P39086 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
GRIK1P39086 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GRIK1P39086 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
GRIK1P39086 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GRIK1P39086 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GRIK1P39086 AC099063.4-201ENST00000641099 1602 ntBASIC15.68■□□□□ 0.1
GRIK1P39086 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.68■□□□□ 0.1
GRIK1P39086 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
GRIK1P39086 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GRIK1P39086 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
GRIK1P39086 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.67■□□□□ 0.1
GRIK1P39086 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GRIK1P39086 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GRIK1P39086 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GRIK1P39086 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GRIK1P39086 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GRIK1P39086 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GRIK1P39086 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.67■□□□□ 0.1
GRIK1P39086 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GRIK1P39086 KRT8P29-201ENST00000420409 1371 ntBASIC15.67■□□□□ 0.1
GRIK1P39086 AC007292.2-201ENST00000593524 1812 ntBASIC15.67■□□□□ 0.1
GRIK1P39086 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.67■□□□□ 0.1
GRIK1P39086 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GRIK1P39086 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.67■□□□□ 0.1
GRIK1P39086 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.67■□□□□ 0.1
GRIK1P39086 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GRIK1P39086 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.67■□□□□ 0.1
GRIK1P39086 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.67■□□□□ 0.1
GRIK1P39086 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.67■□□□□ 0.1
GRIK1P39086 AC010141.1-201ENST00000411585 623 ntBASIC15.67■□□□□ 0.1
GRIK1P39086 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.67■□□□□ 0.1
GRIK1P39086 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.67■□□□□ 0.1
GRIK1P39086 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.67■□□□□ 0.1
GRIK1P39086 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.67■□□□□ 0.1
GRIK1P39086 GCOM2-201ENST00000509133 1104 ntBASIC15.67■□□□□ 0.1
GRIK1P39086 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.67■□□□□ 0.1
GRIK1P39086 AC131206.1-201ENST00000538078 1211 ntBASIC15.67■□□□□ 0.1
GRIK1P39086 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.67■□□□□ 0.1
GRIK1P39086 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.67■□□□□ 0.1
GRIK1P39086 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.67■□□□□ 0.1
GRIK1P39086 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.67■□□□□ 0.1
GRIK1P39086 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.67■□□□□ 0.1
GRIK1P39086 AC008825.2-201ENST00000603374 718 ntBASIC15.67■□□□□ 0.1
GRIK1P39086 BX088702.1-201ENST00000610784 235 ntBASIC15.67■□□□□ 0.1
GRIK1P39086 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.67■□□□□ 0.1
GRIK1P39086 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GRIK1P39086 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GRIK1P39086 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GRIK1P39086 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GRIK1P39086 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GRIK1P39086 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.67■□□□□ 0.1
GRIK1P39086 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GRIK1P39086 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.67■□□□□ 0.1
GRIK1P39086 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GRIK1P39086 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GRIK1P39086 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
GRIK1P39086 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GRIK1P39086 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GRIK1P39086 AC097376.2-205ENST00000610159 5334 ntBASIC15.67■□□□□ 0.1
GRIK1P39086 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.67■□□□□ 0.1
GRIK1P39086 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
GRIK1P39086 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GRIK1P39086 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
GRIK1P39086 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GRIK1P39086 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GRIK1P39086 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
GRIK1P39086 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
GRIK1P39086 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GRIK1P39086 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GRIK1P39086 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GRIK1P39086 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.66■□□□□ 0.1
GRIK1P39086 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.66■□□□□ 0.1
GRIK1P39086 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GRIK1P39086 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.66■□□□□ 0.1
GRIK1P39086 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.66■□□□□ 0.1
GRIK1P39086 AJ011931.1-201ENST00000618749 2492 ntBASIC15.66■□□□□ 0.1
GRIK1P39086 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GRIK1P39086 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GRIK1P39086 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.66■□□□□ 0.1
GRIK1P39086 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
GRIK1P39086 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GRIK1P39086 RNMTL1P1-201ENST00000454103 560 ntBASIC15.66■□□□□ 0.1
GRIK1P39086 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.66■□□□□ 0.1
GRIK1P39086 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.66■□□□□ 0.1
GRIK1P39086 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms