Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
GABRB3P28472 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
GABRB3P28472 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.76□□□□□ -0.05
GABRB3P28472 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.76□□□□□ -0.05
GABRB3P28472 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
GABRB3P28472 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 MST1P2-201ENST00000457982 2291 ntBASIC14.76□□□□□ -0.05
GABRB3P28472 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.76□□□□□ -0.05
GABRB3P28472 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.76□□□□□ -0.05
GABRB3P28472 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.76□□□□□ -0.05
GABRB3P28472 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
GABRB3P28472 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.75□□□□□ -0.05
GABRB3P28472 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.75□□□□□ -0.05
GABRB3P28472 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
GABRB3P28472 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
GABRB3P28472 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.75□□□□□ -0.05
GABRB3P28472 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
GABRB3P28472 FKBP4P6-201ENST00000457486 1332 ntBASIC14.75□□□□□ -0.05
GABRB3P28472 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
GABRB3P28472 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.75□□□□□ -0.05
GABRB3P28472 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
GABRB3P28472 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
GABRB3P28472 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.75□□□□□ -0.05
GABRB3P28472 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.75□□□□□ -0.05
GABRB3P28472 AC068587.3-201ENST00000526613 355 ntBASIC14.75□□□□□ -0.05
GABRB3P28472 TDH-203ENST00000531764 1110 ntBASIC14.75□□□□□ -0.05
GABRB3P28472 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.75□□□□□ -0.05
GABRB3P28472 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.75□□□□□ -0.05
GABRB3P28472 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.75□□□□□ -0.05
GABRB3P28472 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
GABRB3P28472 RN7SL48P-201ENST00000579283 293 ntBASIC14.75□□□□□ -0.05
GABRB3P28472 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.75□□□□□ -0.05
GABRB3P28472 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.75□□□□□ -0.05
GABRB3P28472 BX088702.1-201ENST00000610784 235 ntBASIC14.75□□□□□ -0.05
GABRB3P28472 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
GABRB3P28472 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.75□□□□□ -0.05
GABRB3P28472 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 AL359183.1-201ENST00000623796 2132 ntBASIC14.75□□□□□ -0.05
GABRB3P28472 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
GABRB3P28472 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABRB3P28472 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.75□□□□□ -0.05
GABRB3P28472 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.74□□□□□ -0.05
GABRB3P28472 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.74□□□□□ -0.05
GABRB3P28472 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
GABRB3P28472 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GABRB3P28472 AC139712.1-201ENST00000378256 1875 ntBASIC14.74□□□□□ -0.05
GABRB3P28472 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GABRB3P28472 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.74□□□□□ -0.05
GABRB3P28472 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GABRB3P28472 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GABRB3P28472 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GABRB3P28472 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GABRB3P28472 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GABRB3P28472 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GABRB3P28472 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.74□□□□□ -0.05
GABRB3P28472 AP001889.1-201ENST00000525414 633 ntBASIC14.74□□□□□ -0.05
GABRB3P28472 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
GABRB3P28472 PTP4A1P2-201ENST00000546033 454 ntBASIC14.74□□□□□ -0.05
GABRB3P28472 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.74□□□□□ -0.05
GABRB3P28472 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GABRB3P28472 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.74□□□□□ -0.05
GABRB3P28472 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.74□□□□□ -0.05
GABRB3P28472 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.74□□□□□ -0.05
GABRB3P28472 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GABRB3P28472 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GABRB3P28472 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.74□□□□□ -0.05
GABRB3P28472 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
GABRB3P28472 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.74□□□□□ -0.05
GABRB3P28472 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GABRB3P28472 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms