Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB3BP20337 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB3BP20337 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB3BP20337 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
RAB3BP20337 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB3BP20337 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB3BP20337 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
RAB3BP20337 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB3BP20337 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
RAB3BP20337 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB3BP20337 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB3BP20337 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB3BP20337 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
RAB3BP20337 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB3BP20337 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB3BP20337 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.11□□□□□ -0.31
RAB3BP20337 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.11□□□□□ -0.31
RAB3BP20337 KRT18P3-201ENST00000451602 1288 ntBASIC13.11□□□□□ -0.31
RAB3BP20337 SERBP1P3-201ENST00000459980 809 ntBASIC13.11□□□□□ -0.31
RAB3BP20337 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.11□□□□□ -0.31
RAB3BP20337 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB3BP20337 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.11□□□□□ -0.31
RAB3BP20337 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.11□□□□□ -0.31
RAB3BP20337 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.11□□□□□ -0.31
RAB3BP20337 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RAB3BP20337 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.11□□□□□ -0.31
RAB3BP20337 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB3BP20337 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.11□□□□□ -0.31
RAB3BP20337 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.11□□□□□ -0.31
RAB3BP20337 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB3BP20337 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB3BP20337 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB3BP20337 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.11□□□□□ -0.31
RAB3BP20337 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB3BP20337 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.11□□□□□ -0.31
RAB3BP20337 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB3BP20337 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB3BP20337 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB3BP20337 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB3BP20337 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB3BP20337 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB3BP20337 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB3BP20337 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB3BP20337 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB3BP20337 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB3BP20337 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB3BP20337 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB3BP20337 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
RAB3BP20337 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB3BP20337 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
RAB3BP20337 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RAB3BP20337 AL591122.2-201ENST00000624125 1853 ntBASIC13.1□□□□□ -0.31
RAB3BP20337 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB3BP20337 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RAB3BP20337 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB3BP20337 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB3BP20337 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
RAB3BP20337 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB3BP20337 ZNF259P1-201ENST00000407656 1365 ntBASIC13.1□□□□□ -0.31
RAB3BP20337 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB3BP20337 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB3BP20337 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RAB3BP20337 RN7SL832P-201ENST00000607781 1756 ntBASIC13.1□□□□□ -0.31
RAB3BP20337 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB3BP20337 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB3BP20337 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
RAB3BP20337 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
RAB3BP20337 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB3BP20337 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RAB3BP20337 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.1□□□□□ -0.31
RAB3BP20337 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
RAB3BP20337 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RAB3BP20337 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB3BP20337 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB3BP20337 AC004945.1-201ENST00000416738 983 ntBASIC13.1□□□□□ -0.31
RAB3BP20337 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB3BP20337 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.1□□□□□ -0.31
RAB3BP20337 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.1□□□□□ -0.31
RAB3BP20337 AL079307.3-201ENST00000556114 283 ntBASIC13.1□□□□□ -0.31
RAB3BP20337 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.1□□□□□ -0.31
RAB3BP20337 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RAB3BP20337 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB3BP20337 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
RAB3BP20337 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.1□□□□□ -0.31
RAB3BP20337 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB3BP20337 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB3BP20337 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RAB3BP20337 FAM90A12P-201ENST00000519497 2375 ntBASIC13.1□□□□□ -0.31
RAB3BP20337 FAM90A24P-201ENST00000520792 2369 ntBASIC13.1□□□□□ -0.31
RAB3BP20337 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB3BP20337 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB3BP20337 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB3BP20337 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB3BP20337 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
RAB3BP20337 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB3BP20337 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB3BP20337 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB3BP20337 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB3BP20337 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB3BP20337 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms