Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.13□□□□□ -0.15
NCK1P16333 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NCK1P16333 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
NCK1P16333 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NCK1P16333 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NCK1P16333 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.13□□□□□ -0.15
NCK1P16333 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NCK1P16333 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NCK1P16333 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NCK1P16333 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NCK1P16333 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NCK1P16333 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NCK1P16333 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.13□□□□□ -0.15
NCK1P16333 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.13□□□□□ -0.15
NCK1P16333 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NCK1P16333 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NCK1P16333 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NCK1P16333 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NCK1P16333 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.12□□□□□ -0.15
NCK1P16333 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 RN7SL832P-201ENST00000607781 1756 ntBASIC14.12□□□□□ -0.15
NCK1P16333 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 AC023794.5-201ENST00000564380 2157 ntBASIC14.12□□□□□ -0.15
NCK1P16333 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NCK1P16333 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.12□□□□□ -0.15
NCK1P16333 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.12□□□□□ -0.15
NCK1P16333 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NCK1P16333 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NCK1P16333 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.12□□□□□ -0.15
NCK1P16333 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.12□□□□□ -0.15
NCK1P16333 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.12□□□□□ -0.15
NCK1P16333 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.12□□□□□ -0.15
NCK1P16333 AC023141.5-201ENST00000458585 616 ntBASIC14.12□□□□□ -0.15
NCK1P16333 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.12□□□□□ -0.15
NCK1P16333 AP000344.2-201ENST00000512987 629 ntBASIC14.12□□□□□ -0.15
NCK1P16333 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NCK1P16333 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.12□□□□□ -0.15
NCK1P16333 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.12□□□□□ -0.15
NCK1P16333 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NCK1P16333 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.12□□□□□ -0.15
NCK1P16333 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 AP001059.3-201ENST00000619053 235 ntBASIC14.12□□□□□ -0.15
NCK1P16333 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 AC004461.2-201ENST00000629517 803 ntBASIC14.12□□□□□ -0.15
NCK1P16333 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.12□□□□□ -0.15
NCK1P16333 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
NCK1P16333 AL359183.1-201ENST00000623796 2132 ntBASIC14.12□□□□□ -0.15
NCK1P16333 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NCK1P16333 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NCK1P16333 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.12□□□□□ -0.15
NCK1P16333 AC111170.3-201ENST00000624282 2464 ntBASIC14.12□□□□□ -0.15
NCK1P16333 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NCK1P16333 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.11□□□□□ -0.15
NCK1P16333 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.11□□□□□ -0.15
NCK1P16333 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NCK1P16333 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.11□□□□□ -0.15
NCK1P16333 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NCK1P16333 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NCK1P16333 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NCK1P16333 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NCK1P16333 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.11□□□□□ -0.15
NCK1P16333 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NCK1P16333 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NCK1P16333 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.11□□□□□ -0.15
NCK1P16333 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NCK1P16333 AC131212.3-201ENST00000624087 4219 ntBASIC14.11□□□□□ -0.15
NCK1P16333 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NCK1P16333 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NCK1P16333 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NCK1P16333 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NCK1P16333 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NCK1P16333 MIR574-201ENST00000385209 96 ntBASIC14.11□□□□□ -0.15
NCK1P16333 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.11□□□□□ -0.15
NCK1P16333 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.11□□□□□ -0.15
NCK1P16333 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.11□□□□□ -0.15
NCK1P16333 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NCK1P16333 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms